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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181713320
OGPQ01014534
82054
Verrucomicrobiota
GTA
Tyr
>WENV181713599
OGPQ01051830
246687
Verrucomicrobiota
CGC
Ala
>WENV181713491
OGPQ01029922
344841
Verrucomicrobiota
CAC
Val
>WENV181713410
OGPQ01020715
60880
Verrucomicrobiota
CAG
Leu
>WENV181713583
OGPQ01045535
82056
Verrucomicrobiota
TAA
Leu
>WENV181713367
OGPQ01018031
170105
Verrucomicrobiota
CAT
Met
>WENV181713632
OGPQ01063039
344839
Verrucomicrobiota
GTG
His
>WENV181713443
OGPQ01023167
7274
Verrucomicrobiota
CGA
Ser
>WENV181713534
OGPQ01036116
246260
Verrucomicrobiota
>WENV181713621
OGPQ01059744
155268
Verrucomicrobiota
CGG
Pro
>WENV181713371
OGPQ01018207
345124
Verrucomicrobiota
GTT
Asn
>WENV181713580
OGPQ01045435
368497
Verrucomicrobiota
GCC
Gly
>WENV181713624
OGPQ01060337
345142
Verrucomicrobiota
CCG
Arg
>WENV181713526
OGPQ01035240
246709
Verrucomicrobiota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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