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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181723286
OGPW01003321
119661
Verrucomicrobiota
CAA
Leu
>WENV181722678
OGPW01000143
155256
Verrucomicrobiota
TCT
Arg
>WENV181722852
OGPW01000430
246701
Verrucomicrobiota
TTT
Lys
>WENV181722775
OGPW01000319
345141
Verrucomicrobiota
TTG
Gln
>WENV181722860
OGPW01000455
345133
Verrucomicrobiota
GAC
Val
>WENV181722599
OGPW01000046
82054
Verrucomicrobiota
GTA
Tyr
>WENV181722849
OGPW01000425
246677
Verrucomicrobiota
CTT
Lys
>WENV181722846
OGPW01000424
344844
Verrucomicrobiota
GCA
Cys
>WENV181722740
OGPW01000255
155264
Verrucomicrobiota
GGG
Pro
>WENV181722758
OGPW01000295
344845
Verrucomicrobiota
CTG
Gln
>WENV181722759
OGPW01000295
128202
Verrucomicrobiota
GTC
Asp
>WENV181722948
OGPW01000808
414625
Verrucomicrobiota
CCC
Gly
>WENV181723105
OGPW01001605
46246
Verrucomicrobiota
TGA
Ser
>WENV181722617
OGPW01000069
97755
Verrucomicrobiota
TAG
Leu
>WENV181722847
OGPW01000424
246700
Verrucomicrobiota
TTC
Glu
>WENV181722863
OGPW01000463
246700
Verrucomicrobiota
TTC
Glu
>WENV181723132
OGPW01001758
246687
Verrucomicrobiota
CGC
Ala
>WENV181722947
OGPW01000808
419909
Verrucomicrobiota
TCC
Gly
>WENV181722982
OGPW01000903
344841
Verrucomicrobiota
CAC
Val
>WENV181722854
OGPW01000440
60880
Verrucomicrobiota
CAG
Leu
>WENV181723005
OGPW01000984
82056
Verrucomicrobiota
TAA
Leu
>WENV181722848
OGPW01000425
344842
Verrucomicrobiota
CGT
Thr
>WENV181722718
OGPW01000196
170105
Verrucomicrobiota
CAT
Met
>WENV181723087
OGPW01001459
287733
Verrucomicrobiota
CCA
Trp
>WENV181723122
OGPW01001724
345123
Verrucomicrobiota
TGT
Thr
>WENV181722716
OGPW01000193
345110
Verrucomicrobiota
CCT
Arg
>WENV181723290
OGPW01003380
344839
Verrucomicrobiota
GTG
His
>WENV181722684
OGPW01000145
7274
Verrucomicrobiota
CGA
Ser
>WENV181723006
OGPW01000984
246260
Verrucomicrobiota
>WENV181722681
OGPW01000143
155268
Verrucomicrobiota
CGG
Pro
>WENV181722707
OGPW01000175
82181
Verrucomicrobiota
AAG
Leu
>WENV181723007
OGPW01000984
7256
Verrucomicrobiota
GCT
Ser
>WENV181723481
OGPW01006887
345115
Verrucomicrobiota
CAT
Met
>WENV181722725
OGPW01000226
345119
Verrucomicrobiota
TAC
Val
>WENV181722598
OGPW01000046
345124
Verrucomicrobiota
GTT
Asn
>WENV181722918
OGPW01000671
17023
Verrucomicrobiota
GGA
Ser
>WENV181722862
OGPW01000463
368497
Verrucomicrobiota
GCC
Gly
>WENV181723088
OGPW01001473
368497
Verrucomicrobiota
GCC
Gly
>WENV181723358
OGPW01004486
345142
Verrucomicrobiota
CCG
Arg
>WENV181723291
OGPW01003380
246709
Verrucomicrobiota
CAT
Met
>WENV181723312
OGPW01003695
154693
Verrucomicrobiota
TGG
Pro
>WENV181722943
OGPW01000794
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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