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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181734954
OGQF01021621
155256
Verrucomicrobiota
TCT
Arg
>WENV181735059
OGQF01040828
345141
Verrucomicrobiota
TTG
Gln
>WENV181734997
OGQF01027552
155264
Verrucomicrobiota
GGG
Pro
>WENV181734902
OGQF01013677
46246
Verrucomicrobiota
TGA
Ser
>WENV181735062
OGQF01042450
97755
Verrucomicrobiota
TAG
Leu
>WENV181734945
OGQF01020908
246700
Verrucomicrobiota
TTC
Glu
>WENV181734852
OGQF01010635
246687
Verrucomicrobiota
CGC
Ala
>WENV181734976
OGQF01024678
344841
Verrucomicrobiota
CAC
Val
>WENV181734864
OGQF01010778
345110
Verrucomicrobiota
CCT
Arg
>WENV181735071
OGQF01045655
246728
Verrucomicrobiota
GAA
Phe
>WENV181734953
OGQF01021467
7256
Verrucomicrobiota
GCT
Ser
>WENV181735081
OGQF01051206
345124
Verrucomicrobiota
GTT
Asn
>WENV181735053
OGQF01037269
368497
Verrucomicrobiota
GCC
Gly
>WENV181734944
OGQF01020907
246709
Verrucomicrobiota
CAT
Met
>WENV181734985
OGQF01025594
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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