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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
117 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181736034
OGQH01000004
24650
Bacillota
TAA
Leu
>WENV181736796
OGQH01001871
196621
Bacillota
GTC
Asp
>WENV181737156
OGQH01007784
309417
Bacillota
GGC
Ala
>WENV181736631
OGQH01000972
240192
Bacillota
CTG
Gln
>WENV181736658
OGQH01001093
144612
Bacillota
TCT
Arg
>WENV181737486
OGQH01034259
144612
Bacillota
TCT
Arg
>WENV181736319
OGQH01000219
267649
Bacillota
TAC
Val
>WENV181736300
OGQH01000184
235134
Bacillota
GAA
Phe
>WENV181736382
OGQH01000328
161950
Bacillota
CGG
Pro
>WENV181737323
OGQH01016221
235287
Bacillota
TTT
Lys
>WENV181736958
OGQH01003707
339890
Bacillota
TTG
Gln
>WENV181736614
OGQH01000932
235098
Bacillota
GAC
Val
>WENV181736968
OGQH01003794
235098
Bacillota
GAC
Val
>WENV181737508
OGQH01040578
338152
Bacillota
TTC
Glu
>WENV181736154
OGQH01000038
148239
Bacillota
TCT
Arg
>WENV181736685
OGQH01001146
44854
Bacillota
TGA
Ser
>WENV181736739
OGQH01001462
44854
Bacillota
TGA
Ser
>WENV181737068
OGQH01005704
44854
Bacillota
TGA
Ser
>WENV181737235
OGQH01011871
144577
Bacillota
GAT
Ile
>WENV181737186
OGQH01008750
429443
Bacillota
GCA
Cys
>WENV181737537
OGQH01054320
246023
Bacillota
TGC
Ala
>WENV181737228
OGQH01011322
307003
Bacillota
TGC
Ala
>WENV181736408
OGQH01000372
59312
Bacillota
CAG
Leu
>WENV181736894
OGQH01002723
59312
Bacillota
CAG
Leu
>WENV181736511
OGQH01000630
338147
Bacillota
CTC
Glu
>WENV181736512
OGQH01000630
338147
Bacillota
CTC
Glu
>WENV181736513
OGQH01000630
338147
Bacillota
CTC
Glu
>WENV181736530
OGQH01000666
338147
Bacillota
CTC
Glu
>WENV181737394
OGQH01023103
235150
Bacillota
TGC
Ala
>WENV181736993
OGQH01004251
422863
Bacillota
GCA
Cys
>WENV181737320
OGQH01016221
338208
Bacillota
>WENV181736156
OGQH01000038
340802
Bacillota
TTG
Gln
>WENV181736374
OGQH01000328
237265
Bacillota
TAC
Val
>WENV181736630
OGQH01000972
313331
Bacillota
CTC
Glu
>WENV181736552
OGQH01000709
302152
Bacillota
CTT
Lys
>WENV181737319
OGQH01016221
116350
Bacillota
TAG
Leu
>WENV181736372
OGQH01000326
429429
Bacillota
CCA
Trp
>WENV181736586
OGQH01000803
313454
Bacillota
GAA
Phe
>WENV181737216
OGQH01010605
313454
Bacillota
GAA
Phe
>WENV181736893
OGQH01002723
44859
Bacillota
AAG
Leu
>WENV181737020
OGQH01004654
11034
Bacillota
GGA
Ser
>WENV181737226
OGQH01011307
11034
Bacillota
GGA
Ser
>WENV181737322
OGQH01016221
235290
Bacillota
TTG
Gln
>WENV181737317
OGQH01016221
392638
Bacillota
TGT
Thr
>WENV181736380
OGQH01000328
199192
Bacillota
ACG
Arg
>WENV181737234
OGQH01011871
235087
Bacillota
TGC
Ala
>WENV181737532
OGQH01051185
173314
Bacillota
GAT
Ile
>WENV181736759
OGQH01001596
245298
Bacillota
CGG
Pro
>WENV181737082
OGQH01006074
245298
Bacillota
CGG
Pro
>WENV181736456
OGQH01000459
37269
Bacillota
TGA
Ser
>WENV181736549
OGQH01000701
147741
Bacillota
TCT
Arg
>WENV181736870
OGQH01002510
155089
Bacillota
CAT
Met
>WENV181737103
OGQH01006550
287000
Bacillota
GTT
Asn
>WENV181736816
OGQH01002047
162445
Bacillota
CAT
Met
>WENV181737536
OGQH01054320
201704
Bacillota
GAT
Ile
>WENV181736501
OGQH01000600
152492
Bacillota
GGG
Pro
>WENV181736375
OGQH01000328
240190
Bacillota
TTT
Lys
>WENV181736090
OGQH01000021
100326
Bacillota
GTA
Tyr
>WENV181736744
OGQH01001500
100326
Bacillota
GTA
Tyr
>WENV181737102
OGQH01006513
100326
Bacillota
GTA
Tyr
>WENV181736155
OGQH01000038
144610
Bacillota
GTG
His
>WENV181736301
OGQH01000184
240017
Bacillota
GCC
Gly
>WENV181736758
OGQH01001596
411547
Bacillota
CTG
Gln
>WENV181736775
OGQH01001693
411547
Bacillota
CTG
Gln
>WENV181736842
OGQH01002183
411547
Bacillota
CTG
Gln
>WENV181736896
OGQH01002733
411547
Bacillota
CTG
Gln
>WENV181737081
OGQH01006074
411547
Bacillota
CTG
Gln
>WENV181736399
OGQH01000353
147684
Bacillota
ACG
Arg
>WENV181736686
OGQH01001146
4624
Bacillota
GCT
Ser
>WENV181736740
OGQH01001462
4624
Bacillota
GCT
Ser
>WENV181737069
OGQH01005704
4624
Bacillota
GCT
Ser
>WENV181736298
OGQH01000184
263765
Bacillota
TAC
Val
>WENV181736791
OGQH01001826
412387
Bacillota
GCA
Cys
>WENV181737313
OGQH01016221
411584
Bacillota
TCC
Gly
>WENV181737314
OGQH01016221
313104
Bacillota
TAC
Val
>WENV181736558
OGQH01000729
313164
Bacillota
TTT
Lys
>WENV181736797
OGQH01001871
235095
Bacillota
GGT
Thr
>WENV181737038
OGQH01005049
235095
Bacillota
GGT
Thr
>WENV181737316
OGQH01016221
235289
Bacillota
GTT
Asn
>WENV181736929
OGQH01003258
411549
Bacillota
TTG
Gln
>WENV181737133
OGQH01007405
411549
Bacillota
TTG
Gln
>WENV181737454
OGQH01030315
411549
Bacillota
TTG
Gln
>WENV181736537
OGQH01000678
235142
Bacillota
CTT
Lys
>WENV181737008
OGQH01004453
85288
Bacillota
GTA
Tyr
>WENV181736864
OGQH01002479
148188
Bacillota
CCG
Arg
>WENV181736951
OGQH01003608
148188
Bacillota
CCG
Arg
>WENV181737254
OGQH01012857
148188
Bacillota
CCG
Arg
>WENV181736757
OGQH01001591
80612
Bacillota
GTA
Tyr
>WENV181737132
OGQH01007370
80612
Bacillota
GTA
Tyr
>WENV181737139
OGQH01007510
241432
Bacillota
TGT
Thr
>WENV181736844
OGQH01002199
235124
Bacillota
TGG
Pro
>WENV181736937
OGQH01003389
235124
Bacillota
TGG
Pro
>WENV181737293
OGQH01014654
235124
Bacillota
TGG
Pro
>WENV181737326
OGQH01016221
163753
Bacillota
TGG
Pro
>WENV181736964
OGQH01003750
338129
Bacillota
TGT
Thr
>WENV181737205
OGQH01010290
338129
Bacillota
TGT
Thr
>WENV181737100
OGQH01006458
144583
Bacillota
ACG
Arg
>WENV181737250
OGQH01012602
419877
Bacillota
TCC
Gly
>WENV181736795
OGQH01001871
235171
Bacillota
CCA
Trp
>WENV181736622
OGQH01000962
238974
Bacillota
GAA
Phe
>WENV181736865
OGQH01002484
238974
Bacillota
GAA
Phe
>WENV181737460
OGQH01030697
144621
Bacillota
GTT
Asn
>WENV181736474
OGQH01000530
235113
Bacillota
GAA
Phe
>WENV181737033
OGQH01005008
58712
Bacillota
CAG
Leu
>WENV181737355
OGQH01018891
21693
Bacillota
GCT
Ser
>WENV181737321
OGQH01016221
144762
Bacillota
TCT
Arg
>WENV181737172
OGQH01008371
245296
Bacillota
CCC
Gly
>WENV181736377
OGQH01000328
247849
Bacillota
TGT
Thr
>WENV181736667
OGQH01001117
144594
Bacillota
CAC
Val
>WENV181736860
OGQH01002445
414486
Bacillota
CCC
Gly
>WENV181736276
OGQH01000160
272488
Bacillota
GAA
Phe
>WENV181737229
OGQH01011339
114075
Bacillota
TAG
Leu
>WENV181736994
OGQH01004251
45160
Bacillota
CAA
Leu
>WENV181737433
OGQH01027981
119513
Bacillota
CAA
Leu
>WENV181737489
OGQH01034439
292012
Bacillota
TGC
Ala
>WENV181736982
OGQH01004047
338128
Bacillota
TTC
Glu
>WENV181737042
OGQH01005230
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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