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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181739761
OGQJ01000795
235102
Bacteroidota
CGT
Thr
>WENV181739799
OGQJ01000979
243025
Bacteroidota
CAT
Met
>WENV181740155
OGQJ01003052
243025
Bacteroidota
CAT
Met
>WENV181741063
OGQJ01056481
153993
Bacteroidota
GAT
Ile
>WENV181739829
OGQJ01001117
17323
Bacteroidota
GGA
Ser
>WENV181740079
OGQJ01002449
17323
Bacteroidota
GGA
Ser
>WENV181740892
OGQJ01033860
338486
Bacteroidota
CAT
Met
>WENV181739955
OGQJ01001730
415410
Bacteroidota
TTG
Gln
>WENV181739605
OGQJ01000387
344692
Bacteroidota
GGT
Thr
>WENV181740661
OGQJ01013616
344692
Bacteroidota
GGT
Thr
>WENV181740228
OGQJ01003798
341950
Bacteroidota
>WENV181740156
OGQJ01003077
338124
Bacteroidota
CCG
Arg
>WENV181740007
OGQJ01001953
126641
Bacteroidota
TAC
Val
>WENV181740234
OGQJ01003895
338132
Bacteroidota
GCA
Cys
>WENV181741072
OGQJ01058373
193809
Bacteroidota
CAT
Met
>WENV181739282
OGQJ01000007
235165
Bacteroidota
CCA
Trp
>WENV181739870
OGQJ01001308
280660
Bacteroidota
CCA
Trp
>WENV181740675
OGQJ01014600
144656
Bacteroidota
GTG
His
>WENV181739797
OGQJ01000971
235207
Bacteroidota
CAT
Met
>WENV181739604
OGQJ01000376
80607
Bacteroidota
GTA
Tyr
>WENV181740031
OGQJ01002090
80607
Bacteroidota
GTA
Tyr
>WENV181740036
OGQJ01002151
154643
Bacteroidota
CAT
Met
>WENV181740296
OGQJ01004765
419272
Bacteroidota
CTG
Gln
>WENV181739384
OGQJ01000081
144639
Bacteroidota
GGC
Ala
>WENV181740881
OGQJ01032975
151121
Bacteroidota
CAT
Met
>WENV181739525
OGQJ01000251
44852
Bacteroidota
TAA
Leu
>WENV181739365
OGQJ01000060
150485
Bacteroidota
GTT
Asn
>WENV181739801
OGQJ01000994
50727
Bacteroidota
TGA
Ser
>WENV181740020
OGQJ01002026
50727
Bacteroidota
TGA
Ser
>WENV181740021
OGQJ01002027
50727
Bacteroidota
TGA
Ser
>WENV181740110
OGQJ01002658
132360
Bacteroidota
GGG
Pro
>WENV181740727
OGQJ01018631
132360
Bacteroidota
GGG
Pro
>WENV181740187
OGQJ01003447
425638
Bacteroidota
CTG
Gln
>WENV181739409
OGQJ01000107
239647
Bacteroidota
TTT
Lys
>WENV181739804
OGQJ01001004
19317
Bacteroidota
GGA
Ser
>WENV181740077
OGQJ01002447
353927
Bacteroidota
TTC
Glu
>WENV181739864
OGQJ01001266
414426
Bacteroidota
CTG
Gln
>WENV181740465
OGQJ01008184
16224
Bacteroidota
GGA
Ser
>WENV181739686
OGQJ01000555
151960
Bacteroidota
GGC
Ala
>WENV181740418
OGQJ01006957
16220
Bacteroidota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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