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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181741896
OGQK01004053
119661
Verrucomicrobiota
CAA
Leu
>WENV181741770
OGQK01001952
155256
Verrucomicrobiota
TCT
Arg
>WENV181741855
OGQK01003038
246701
Verrucomicrobiota
TTT
Lys
>WENV181741688
OGQK01001212
345141
Verrucomicrobiota
TTG
Gln
>WENV181741919
OGQK01004536
345133
Verrucomicrobiota
GAC
Val
>WENV181742167
OGQK01014560
82054
Verrucomicrobiota
GTA
Tyr
>WENV181741817
OGQK01002530
246677
Verrucomicrobiota
CTT
Lys
>WENV181741497
OGQK01000399
344844
Verrucomicrobiota
GCA
Cys
>WENV181741589
OGQK01000746
155264
Verrucomicrobiota
GGG
Pro
>WENV181741791
OGQK01002114
344845
Verrucomicrobiota
CTG
Gln
>WENV181741771
OGQK01001955
128202
Verrucomicrobiota
GTC
Asp
>WENV181741769
OGQK01001915
414625
Verrucomicrobiota
CCC
Gly
>WENV181741673
OGQK01001085
46246
Verrucomicrobiota
TGA
Ser
>WENV181741498
OGQK01000399
246700
Verrucomicrobiota
TTC
Glu
>WENV181741779
OGQK01002021
246700
Verrucomicrobiota
TTC
Glu
>WENV181741792
OGQK01002136
246687
Verrucomicrobiota
CGC
Ala
>WENV181741768
OGQK01001915
419909
Verrucomicrobiota
TCC
Gly
>WENV181741748
OGQK01001649
344841
Verrucomicrobiota
CAC
Val
>WENV181742114
OGQK01011692
82056
Verrucomicrobiota
TAA
Leu
>WENV181741816
OGQK01002530
344842
Verrucomicrobiota
CGT
Thr
>WENV181741802
OGQK01002287
170105
Verrucomicrobiota
CAT
Met
>WENV181741895
OGQK01004045
345123
Verrucomicrobiota
TGT
Thr
>WENV181741581
OGQK01000724
345110
Verrucomicrobiota
CCT
Arg
>WENV181741901
OGQK01004090
344839
Verrucomicrobiota
GTG
His
>WENV181741876
OGQK01003609
246260
Verrucomicrobiota
>WENV181741746
OGQK01001621
155268
Verrucomicrobiota
CGG
Pro
>WENV181741678
OGQK01001162
246728
Verrucomicrobiota
GAA
Phe
>WENV181741638
OGQK01000931
7256
Verrucomicrobiota
GCT
Ser
>WENV181741496
OGQK01000394
345115
Verrucomicrobiota
CAT
Met
>WENV181741590
OGQK01000756
345119
Verrucomicrobiota
TAC
Val
>WENV181741940
OGQK01005164
345124
Verrucomicrobiota
GTT
Asn
>WENV181741582
OGQK01000732
368497
Verrucomicrobiota
GCC
Gly
>WENV181741808
OGQK01002408
368497
Verrucomicrobiota
GCC
Gly
>WENV181741543
OGQK01000557
345142
Verrucomicrobiota
CCG
Arg
>WENV181741902
OGQK01004090
246709
Verrucomicrobiota
CAT
Met
>WENV181741679
OGQK01001162
154693
Verrucomicrobiota
TGG
Pro
>WENV181741583
OGQK01000735
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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