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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181758173
OGQU01000349
235097
Bacteroidota
TTT
Lys
>WENV181758249
OGQU01000465
235097
Bacteroidota
TTT
Lys
>WENV181758255
OGQU01000487
235102
Bacteroidota
CGT
Thr
>WENV181758828
OGQU01005078
267954
Bacteroidota
GCC
Gly
>WENV181758449
OGQU01001156
144657
Bacteroidota
CGG
Pro
>WENV181758277
OGQU01000548
243025
Bacteroidota
CAT
Met
>WENV181758529
OGQU01001602
243025
Bacteroidota
CAT
Met
>WENV181758919
OGQU01006650
243025
Bacteroidota
CAT
Met
>WENV181758043
OGQU01000158
338155
Bacteroidota
CTC
Glu
>WENV181758495
OGQU01001418
339341
Bacteroidota
GGT
Thr
>WENV181758500
OGQU01001450
17323
Bacteroidota
GGA
Ser
>WENV181758540
OGQU01001624
235817
Bacteroidota
GAA
Phe
>WENV181758051
OGQU01000174
338486
Bacteroidota
CAT
Met
>WENV181758536
OGQU01001612
338486
Bacteroidota
CAT
Met
>WENV181757890
OGQU01000007
436206
Bacteroidota
TTG
Gln
>WENV181758069
OGQU01000188
436206
Bacteroidota
TTG
Gln
>WENV181758087
OGQU01000226
20893
Bacteroidota
GGA
Ser
>WENV181758501
OGQU01001452
344692
Bacteroidota
GGT
Thr
>WENV181758104
OGQU01000245
338124
Bacteroidota
CCG
Arg
>WENV181758239
OGQU01000442
238121
Bacteroidota
CTT
Lys
>WENV181758240
OGQU01000442
238121
Bacteroidota
CTT
Lys
>WENV181758006
OGQU01000110
126641
Bacteroidota
TAC
Val
>WENV181758301
OGQU01000638
126641
Bacteroidota
TAC
Val
>WENV181758302
OGQU01000638
126641
Bacteroidota
TAC
Val
>WENV181758016
OGQU01000127
338132
Bacteroidota
GCA
Cys
>WENV181758028
OGQU01000144
338132
Bacteroidota
GCA
Cys
>WENV181758073
OGQU01000196
338132
Bacteroidota
GCA
Cys
>WENV181758400
OGQU01000979
338132
Bacteroidota
GCA
Cys
>WENV181758085
OGQU01000225
193809
Bacteroidota
CAT
Met
>WENV181757973
OGQU01000085
301449
Bacteroidota
CGG
Pro
>WENV181757985
OGQU01000091
301449
Bacteroidota
CGG
Pro
>WENV181758451
OGQU01001165
301449
Bacteroidota
CGG
Pro
>WENV181758580
OGQU01001750
301449
Bacteroidota
CGG
Pro
>WENV181757989
OGQU01000094
144933
Bacteroidota
TCT
Arg
>WENV181758441
OGQU01001133
144933
Bacteroidota
TCT
Arg
>WENV181758282
OGQU01000572
144656
Bacteroidota
GTG
His
>WENV181757963
OGQU01000072
235207
Bacteroidota
CAT
Met
>WENV181757964
OGQU01000072
235207
Bacteroidota
CAT
Met
>WENV181757960
OGQU01000070
80607
Bacteroidota
GTA
Tyr
>WENV181758114
OGQU01000262
80607
Bacteroidota
GTA
Tyr
>WENV181758161
OGQU01000331
80607
Bacteroidota
GTA
Tyr
>WENV181758178
OGQU01000353
80607
Bacteroidota
GTA
Tyr
>WENV181759125
OGQU01013895
80607
Bacteroidota
GTA
Tyr
>WENV181758242
OGQU01000448
16999
Bacteroidota
GGA
Ser
>WENV181758354
OGQU01000831
80614
Bacteroidota
>WENV181757980
OGQU01000087
154643
Bacteroidota
CAT
Met
>WENV181758097
OGQU01000239
95559
Bacteroidota
TAG
Leu
>WENV181757916
OGQU01000025
419272
Bacteroidota
CTG
Gln
>WENV181758339
OGQU01000781
144655
Bacteroidota
GGC
Ala
>WENV181757911
OGQU01000019
95875
Bacteroidota
TAG
Leu
>WENV181757915
OGQU01000025
139743
Bacteroidota
GGG
Pro
>WENV181757967
OGQU01000079
139743
Bacteroidota
GGG
Pro
>WENV181758603
OGQU01002025
139743
Bacteroidota
GGG
Pro
>WENV181757966
OGQU01000078
240012
Bacteroidota
CCC
Gly
>WENV181758165
OGQU01000333
44852
Bacteroidota
TAA
Leu
>WENV181758080
OGQU01000213
280513
Bacteroidota
TTT
Lys
>WENV181759126
OGQU01013895
338165
Bacteroidota
GGT
Thr
>WENV181758248
OGQU01000462
425638
Bacteroidota
CTG
Gln
>WENV181758527
OGQU01001575
353927
Bacteroidota
TTC
Glu
>WENV181758898
OGQU01006269
185921
Bacteroidota
GTC
Asp
>WENV181758042
OGQU01000158
23696
Bacteroidota
GCT
Ser
>WENV181758179
OGQU01000355
414426
Bacteroidota
CTG
Gln
>WENV181758928
OGQU01006977
414426
Bacteroidota
CTG
Gln
>WENV181757944
OGQU01000048
55270
Bacteroidota
TGA
Ser
>WENV181758044
OGQU01000159
55270
Bacteroidota
TGA
Ser
>WENV181758105
OGQU01000247
55270
Bacteroidota
TGA
Ser
>WENV181758156
OGQU01000319
55270
Bacteroidota
TGA
Ser
>WENV181757912
OGQU01000022
48914
Bacteroidota
TGA
Ser
>WENV181757903
OGQU01000015
16224
Bacteroidota
GGA
Ser
>WENV181757917
OGQU01000025
16220
Bacteroidota
GGA
Ser
>WENV181757889
OGQU01000006
338125
Bacteroidota
CCT
Arg
>WENV181757954
OGQU01000064
338125
Bacteroidota
CCT
Arg
>WENV181758475
OGQU01001338
338125
Bacteroidota
CCT
Arg
>WENV181758320
OGQU01000701
235129
Bacteroidota
GCC
Gly
>WENV181758322
OGQU01000701
235129
Bacteroidota
GCC
Gly
>WENV181758329
OGQU01000741
235129
Bacteroidota
GCC
Gly
>WENV181759046
OGQU01010137
235129
Bacteroidota
GCC
Gly
>WENV181758602
OGQU01002010
313363
Bacteroidota
GAA
Phe
>WENV181758424
OGQU01001048
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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