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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
94 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181760071
OGQV01001577
196621
Bacillota
GTC
Asp
>WENV181760278
OGQV01003161
155958
Bacillota
GAT
Ile
>WENV181760746
OGQV01022346
158247
Bacillota
>WENV181760781
OGQV01026622
144612
Bacillota
TCT
Arg
>WENV181760343
OGQV01003951
235134
Bacillota
GAA
Phe
>WENV181760206
OGQV01002457
235098
Bacillota
GAC
Val
>WENV181760280
OGQV01003178
235098
Bacillota
GAC
Val
>WENV181760302
OGQV01003356
235098
Bacillota
GAC
Val
>WENV181760499
OGQV01006833
235098
Bacillota
GAC
Val
>WENV181760456
OGQV01005995
338152
Bacillota
TTC
Glu
>WENV181760092
OGQV01001700
44854
Bacillota
TGA
Ser
>WENV181760289
OGQV01003284
44854
Bacillota
TGA
Ser
>WENV181760393
OGQV01004822
44854
Bacillota
TGA
Ser
>WENV181760310
OGQV01003505
235154
Bacillota
GTT
Asn
>WENV181760669
OGQV01015169
37071
Bacillota
TGA
Ser
>WENV181760382
OGQV01004604
238910
Bacillota
CTT
Lys
>WENV181760768
OGQV01024652
338147
Bacillota
CTC
Glu
>WENV181760415
OGQV01005249
340802
Bacillota
TTG
Gln
>WENV181760894
OGQV01050112
293599
Bacillota
CTT
Lys
>WENV181760319
OGQV01003590
235114
Bacillota
TTT
Lys
>WENV181760459
OGQV01005995
144668
Bacillota
GTC
Asp
>WENV181760827
OGQV01031895
116350
Bacillota
TAG
Leu
>WENV181759789
OGQV01000576
198770
Bacillota
GTC
Asp
>WENV181759625
OGQV01000227
429429
Bacillota
CCA
Trp
>WENV181760588
OGQV01010256
41154
Bacillota
TAA
Leu
>WENV181760233
OGQV01002781
44859
Bacillota
AAG
Leu
>WENV181759952
OGQV01001095
11034
Bacillota
GGA
Ser
>WENV181760135
OGQV01001956
11034
Bacillota
GGA
Ser
>WENV181760027
OGQV01001364
274189
Bacillota
TGT
Thr
>WENV181760782
OGQV01026651
274189
Bacillota
TGT
Thr
>WENV181759811
OGQV01000630
235079
Bacillota
GAA
Phe
>WENV181760413
OGQV01005213
295714
Bacillota
GCC
Gly
>WENV181760578
OGQV01009679
295714
Bacillota
GCC
Gly
>WENV181760113
OGQV01001779
338149
Bacillota
CTC
Glu
>WENV181760396
OGQV01004839
245298
Bacillota
CGG
Pro
>WENV181760608
OGQV01011493
245298
Bacillota
CGG
Pro
>WENV181759780
OGQV01000553
37269
Bacillota
TGA
Ser
>WENV181759758
OGQV01000511
287000
Bacillota
GTT
Asn
>WENV181759759
OGQV01000511
287000
Bacillota
GTT
Asn
>WENV181760549
OGQV01008291
162445
Bacillota
CAT
Met
>WENV181760532
OGQV01007639
152492
Bacillota
GGG
Pro
>WENV181759809
OGQV01000630
235078
Bacillota
TAC
Val
>WENV181760414
OGQV01005249
144610
Bacillota
GTG
His
>WENV181760188
OGQV01002356
240017
Bacillota
GCC
Gly
>WENV181760395
OGQV01004839
411547
Bacillota
CTG
Gln
>WENV181760518
OGQV01007223
411547
Bacillota
CTG
Gln
>WENV181760607
OGQV01011493
411547
Bacillota
CTG
Gln
>WENV181760091
OGQV01001689
411547
Bacillota
CTG
Gln
>WENV181760387
OGQV01004705
147684
Bacillota
ACG
Arg
>WENV181760093
OGQV01001700
4624
Bacillota
GCT
Ser
>WENV181760290
OGQV01003284
4624
Bacillota
GCT
Ser
>WENV181760394
OGQV01004822
4624
Bacillota
GCT
Ser
>WENV181760069
OGQV01001577
235095
Bacillota
GGT
Thr
>WENV181760072
OGQV01001577
235095
Bacillota
GGT
Thr
>WENV181760942
OGQV01067990
239832
Bacillota
TGT
Thr
>WENV181760173
OGQV01002251
411549
Bacillota
TTG
Gln
>WENV181760719
OGQV01019482
411549
Bacillota
TTG
Gln
>WENV181760643
OGQV01013152
235142
Bacillota
CTT
Lys
>WENV181759575
OGQV01000148
245386
Bacillota
CCA
Trp
>WENV181760474
OGQV01006276
245386
Bacillota
CCA
Trp
>WENV181760034
OGQV01001407
148188
Bacillota
CCG
Arg
>WENV181760270
OGQV01003094
148188
Bacillota
CCG
Arg
>WENV181760036
OGQV01001428
80612
Bacillota
GTA
Tyr
>WENV181760526
OGQV01007454
163943
Bacillota
GTC
Asp
>WENV181759469
OGQV01000042
298620
Bacillota
CAT
Met
>WENV181760158
OGQV01002169
235124
Bacillota
TGG
Pro
>WENV181760185
OGQV01002328
235124
Bacillota
TGG
Pro
>WENV181760938
OGQV01067664
345314
Bacillota
TTG
Gln
>WENV181760614
OGQV01011629
338129
Bacillota
TGT
Thr
>WENV181760171
OGQV01002237
157838
Bacillota
GTC
Asp
>WENV181760570
OGQV01009207
144583
Bacillota
ACG
Arg
>WENV181760590
OGQV01010293
247734
Bacillota
TGC
Ala
>WENV181760665
OGQV01014598
419877
Bacillota
TCC
Gly
>WENV181760070
OGQV01001577
235171
Bacillota
CCA
Trp
>WENV181760114
OGQV01001779
144621
Bacillota
GTT
Asn
>WENV181760276
OGQV01003141
144621
Bacillota
GTT
Asn
>WENV181760318
OGQV01003590
235113
Bacillota
GAA
Phe
>WENV181760252
OGQV01002922
58712
Bacillota
CAG
Leu
>WENV181760828
OGQV01031895
144762
Bacillota
TCT
Arg
>WENV181760322
OGQV01003616
245296
Bacillota
CCC
Gly
>WENV181760837
OGQV01032626
272992
Bacillota
CTT
Lys
>WENV181760739
OGQV01021833
344240
Bacillota
GCC
Gly
>WENV181760738
OGQV01021833
196632
Bacillota
GTC
Asp
>WENV181760176
OGQV01002257
157635
Bacillota
TCT
Arg
>WENV181760127
OGQV01001897
144594
Bacillota
CAC
Val
>WENV181760369
OGQV01004323
144594
Bacillota
CAC
Val
>WENV181760869
OGQV01038337
95563
Bacillota
GTA
Tyr
>WENV181759606
OGQV01000188
338127
Bacillota
TTG
Gln
>WENV181760118
OGQV01001803
272488
Bacillota
GAA
Phe
>WENV181760575
OGQV01009485
119513
Bacillota
CAA
Leu
>WENV181760918
OGQV01060023
292012
Bacillota
TGC
Ala
>WENV181760425
OGQV01005399
273862
Bacillota
TGC
Ala
>WENV181760821
OGQV01031895
338207
Bacillota
TTC
Glu
>WENV181760377
OGQV01004555
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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