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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
129 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181767674
OGRA01000001
95987
Bacteroidota
CAA
Leu
>WENV181768679
OGRA01004158
141635
Bacteroidota
TAC
Val
>WENV181768149
OGRA01000734
267954
Bacteroidota
GCC
Gly
>WENV181768495
OGRA01002433
267954
Bacteroidota
GCC
Gly
>WENV181769391
OGRA01031792
146761
Bacteroidota
GAT
Ile
>WENV181767781
OGRA01000056
243025
Bacteroidota
CAT
Met
>WENV181767971
OGRA01000298
243025
Bacteroidota
CAT
Met
>WENV181768966
OGRA01008984
243025
Bacteroidota
CAT
Met
>WENV181768976
OGRA01009527
243025
Bacteroidota
CAT
Met
>WENV181767702
OGRA01000009
126966
Bacteroidota
TAC
Val
>WENV181767703
OGRA01000009
126966
Bacteroidota
TAC
Val
>WENV181767964
OGRA01000291
338155
Bacteroidota
CTC
Glu
>WENV181768639
OGRA01003732
338155
Bacteroidota
CTC
Glu
>WENV181768683
OGRA01004186
126965
Bacteroidota
GGG
Pro
>WENV181769102
OGRA01012684
153993
Bacteroidota
GAT
Ile
>WENV181769063
OGRA01011456
339341
Bacteroidota
GGT
Thr
>WENV181768372
OGRA01001591
58715
Bacteroidota
GAG
Leu
>WENV181768121
OGRA01000664
17323
Bacteroidota
GGA
Ser
>WENV181768273
OGRA01001113
17323
Bacteroidota
GGA
Ser
>WENV181768527
OGRA01002688
95618
Bacteroidota
TAG
Leu
>WENV181768625
OGRA01003567
24174
Bacteroidota
GCT
Ser
>WENV181767853
OGRA01000128
338486
Bacteroidota
CAT
Met
>WENV181768393
OGRA01001735
338486
Bacteroidota
CAT
Met
>WENV181768820
OGRA01005898
338486
Bacteroidota
CAT
Met
>WENV181767930
OGRA01000236
411543
Bacteroidota
CTG
Gln
>WENV181768009
OGRA01000376
411543
Bacteroidota
CTG
Gln
>WENV181768591
OGRA01003300
59689
Bacteroidota
CAG
Leu
>WENV181767910
OGRA01000208
436206
Bacteroidota
TTG
Gln
>WENV181768270
OGRA01001092
436206
Bacteroidota
TTG
Gln
>WENV181768279
OGRA01001121
436206
Bacteroidota
TTG
Gln
>WENV181768513
OGRA01002566
436206
Bacteroidota
TTG
Gln
>WENV181769245
OGRA01019457
436206
Bacteroidota
TTG
Gln
>WENV181768258
OGRA01001077
20893
Bacteroidota
GGA
Ser
>WENV181767684
OGRA01000004
128251
Bacteroidota
TGG
Pro
>WENV181767759
OGRA01000043
155123
Bacteroidota
GTT
Asn
>WENV181767760
OGRA01000043
155123
Bacteroidota
GTT
Asn
>WENV181768386
OGRA01001714
344692
Bacteroidota
GGT
Thr
>WENV181768656
OGRA01003840
145504
Bacteroidota
TGT
Thr
>WENV181767929
OGRA01000231
235182
Bacteroidota
>WENV181768767
OGRA01005353
272983
Bacteroidota
CGT
Thr
>WENV181767874
OGRA01000156
338124
Bacteroidota
CCG
Arg
>WENV181768250
OGRA01001045
338124
Bacteroidota
CCG
Arg
>WENV181767696
OGRA01000008
235203
Bacteroidota
TTT
Lys
>WENV181767959
OGRA01000284
238121
Bacteroidota
CTT
Lys
>WENV181767960
OGRA01000284
238121
Bacteroidota
CTT
Lys
>WENV181768690
OGRA01004235
126641
Bacteroidota
TAC
Val
>WENV181768101
OGRA01000606
338132
Bacteroidota
GCA
Cys
>WENV181768251
OGRA01001049
338132
Bacteroidota
GCA
Cys
>WENV181768316
OGRA01001350
338132
Bacteroidota
GCA
Cys
>WENV181768375
OGRA01001602
338132
Bacteroidota
GCA
Cys
>WENV181768593
OGRA01003353
338132
Bacteroidota
GCA
Cys
>WENV181768600
OGRA01003441
338132
Bacteroidota
GCA
Cys
>WENV181768802
OGRA01005644
338132
Bacteroidota
GCA
Cys
>WENV181769021
OGRA01010415
144688
Bacteroidota
CAT
Met
>WENV181767897
OGRA01000195
181746
Bacteroidota
GGC
Ala
>WENV181767872
OGRA01000152
58714
Bacteroidota
CAA
Leu
>WENV181767860
OGRA01000137
235165
Bacteroidota
CCA
Trp
>WENV181768425
OGRA01001994
301449
Bacteroidota
CGG
Pro
>WENV181768524
OGRA01002671
301449
Bacteroidota
CGG
Pro
>WENV181768876
OGRA01006660
301449
Bacteroidota
CGG
Pro
>WENV181768884
OGRA01006759
301449
Bacteroidota
CGG
Pro
>WENV181769372
OGRA01029785
301449
Bacteroidota
CGG
Pro
>WENV181768302
OGRA01001286
144933
Bacteroidota
TCT
Arg
>WENV181767808
OGRA01000085
144933
Bacteroidota
TCT
Arg
>WENV181768047
OGRA01000472
144933
Bacteroidota
TCT
Arg
>WENV181767766
OGRA01000049
141414
Bacteroidota
GGG
Pro
>WENV181767895
OGRA01000193
141414
Bacteroidota
GGG
Pro
>WENV181768163
OGRA01000781
141414
Bacteroidota
GGG
Pro
>WENV181768261
OGRA01001083
141414
Bacteroidota
GGG
Pro
>WENV181769720
OGRA01075591
244295
Bacteroidota
CCA
Trp
>WENV181767937
OGRA01000250
303954
Bacteroidota
GCC
Gly
>WENV181767938
OGRA01000250
303954
Bacteroidota
GCC
Gly
>WENV181768086
OGRA01000574
303954
Bacteroidota
GCC
Gly
>WENV181767758
OGRA01000042
144656
Bacteroidota
GTG
His
>WENV181767865
OGRA01000142
144656
Bacteroidota
GTG
His
>WENV181768115
OGRA01000644
235207
Bacteroidota
CAT
Met
>WENV181768249
OGRA01001040
235207
Bacteroidota
CAT
Met
>WENV181768472
OGRA01002306
235207
Bacteroidota
CAT
Met
>WENV181767907
OGRA01000203
235207
Bacteroidota
CAT
Met
>WENV181768512
OGRA01002554
144659
Bacteroidota
GTG
His
>WENV181768464
OGRA01002238
235180
Bacteroidota
CCA
Trp
>WENV181768190
OGRA01000845
80607
Bacteroidota
GTA
Tyr
>WENV181768207
OGRA01000928
80607
Bacteroidota
GTA
Tyr
>WENV181768308
OGRA01001304
80607
Bacteroidota
GTA
Tyr
>WENV181768862
OGRA01006435
80614
Bacteroidota
>WENV181768299
OGRA01001262
80614
Bacteroidota
>WENV181767692
OGRA01000007
154643
Bacteroidota
CAT
Met
>WENV181767961
OGRA01000285
154643
Bacteroidota
CAT
Met
>WENV181768617
OGRA01003532
154643
Bacteroidota
CAT
Met
>WENV181768426
OGRA01002013
95559
Bacteroidota
TAG
Leu
>WENV181767951
OGRA01000277
144639
Bacteroidota
GGC
Ala
>WENV181768022
OGRA01000414
144639
Bacteroidota
GGC
Ala
>WENV181767698
OGRA01000009
263771
Bacteroidota
CTT
Lys
>WENV181768108
OGRA01000614
338164
Bacteroidota
TTC
Glu
>WENV181767805
OGRA01000077
95875
Bacteroidota
TAG
Leu
>WENV181768373
OGRA01001594
151121
Bacteroidota
CAT
Met
>WENV181768969
OGRA01009338
151121
Bacteroidota
CAT
Met
>WENV181768766
OGRA01005350
338314
Bacteroidota
CCT
Arg
>WENV181768895
OGRA01007025
139743
Bacteroidota
GGG
Pro
>WENV181768309
OGRA01001306
240012
Bacteroidota
CCC
Gly
>WENV181768414
OGRA01001858
240012
Bacteroidota
CCC
Gly
>WENV181768151
OGRA01000742
44852
Bacteroidota
TAA
Leu
>WENV181768165
OGRA01000789
147439
Bacteroidota
TCT
Arg
>WENV181767883
OGRA01000167
280513
Bacteroidota
TTT
Lys
>WENV181768649
OGRA01003775
150485
Bacteroidota
GTT
Asn
>WENV181768650
OGRA01003775
150485
Bacteroidota
GTT
Asn
>WENV181768152
OGRA01000744
411550
Bacteroidota
CTG
Gln
>WENV181768153
OGRA01000744
411550
Bacteroidota
CTG
Gln
>WENV181768673
OGRA01004103
19528
Bacteroidota
GGA
Ser
>WENV181767958
OGRA01000284
50727
Bacteroidota
TGA
Ser
>WENV181768396
OGRA01001748
425638
Bacteroidota
CTG
Gln
>WENV181769269
OGRA01020541
425638
Bacteroidota
CTG
Gln
>WENV181767837
OGRA01000109
353927
Bacteroidota
TTC
Glu
>WENV181767879
OGRA01000163
353927
Bacteroidota
TTC
Glu
>WENV181767880
OGRA01000163
353927
Bacteroidota
TTC
Glu
>WENV181769297
OGRA01022400
139062
Bacteroidota
TGG
Pro
>WENV181767963
OGRA01000291
23696
Bacteroidota
GCT
Ser
>WENV181768248
OGRA01001032
414426
Bacteroidota
CTG
Gln
>WENV181768383
OGRA01001693
414426
Bacteroidota
CTG
Gln
>WENV181768603
OGRA01003453
414426
Bacteroidota
CTG
Gln
>WENV181767735
OGRA01000020
56823
Bacteroidota
TGA
Ser
>WENV181767882
OGRA01000165
56823
Bacteroidota
TGA
Ser
>WENV181768672
OGRA01004103
56823
Bacteroidota
TGA
Ser
>WENV181768724
OGRA01004893
16224
Bacteroidota
GGA
Ser
>WENV181769582
OGRA01053403
16220
Bacteroidota
GGA
Ser
>WENV181768370
OGRA01001591
235129
Bacteroidota
GCC
Gly
>WENV181768475
OGRA01002321
235129
Bacteroidota
GCC
Gly
>WENV181768599
OGRA01003426
313363
Bacteroidota
GAA
Phe
>WENV181768209
OGRA01000939
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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