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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181778290
OGRH01030624
235146
Actinomycetota
CGT
Thr
>WENV181778291
OGRH01031045
235347
Actinomycetota
GGC
Ala
>WENV181778328
OGRH01033857
144589
Actinomycetota
ACG
Arg
>WENV181778299
OGRH01031920
37070
Actinomycetota
CGA
Ser
>WENV181778049
OGRH01012154
201717
Actinomycetota
CTT
Lys
>WENV181777981
OGRH01008591
235194
Actinomycetota
GTG
His
>WENV181778114
OGRH01015758
411601
Actinomycetota
CCC
Gly
>WENV181778293
OGRH01031566
174149
Actinomycetota
GAT
Ile
>WENV181778292
OGRH01031159
16219
Actinomycetota
GCT
Ser
>WENV181778294
OGRH01031566
235174
Actinomycetota
TGC
Ala
>WENV181778327
OGRH01033748
235101
Actinomycetota
TTT
Lys
>WENV181778366
OGRH01041106
144625
Actinomycetota
GTC
Asp
>WENV181777821
OGRH01003598
44862
Actinomycetota
CGA
Ser
>WENV181778385
OGRH01045668
313386
Actinomycetota
CGT
Thr
>WENV181778014
OGRH01010438
295695
Actinomycetota
CTC
Glu
>WENV181778440
OGRH01067611
98279
Actinomycetota
GTA
Tyr
>WENV181778015
OGRH01010438
338148
Actinomycetota
CTG
Gln
>WENV181778054
OGRH01012656
53078
Actinomycetota
GGA
Ser
>WENV181778230
OGRH01024317
144825
Actinomycetota
CAT
Met
>WENV181778219
OGRH01023030
235348
Actinomycetota
CCT
Arg
>WENV181778419
OGRH01055047
411554
Actinomycetota
CCC
Gly
>WENV181778386
OGRH01045668
113601
Actinomycetota
TAG
Leu
>WENV181778216
OGRH01022265
144595
Actinomycetota
CAA
Leu
>WENV181778363
OGRH01040986
145343
Actinomycetota
GGG
Pro
>WENV181778365
OGRH01041106
393408
Actinomycetota
TTC
Glu
>WENV181778267
OGRH01027633
80622
Actinomycetota
CAG
Leu
>WENV181778281
OGRH01029621
412834
Actinomycetota
GCA
Cys
>WENV181778406
OGRH01051556
235173
Actinomycetota
GGC
Ala
>WENV181778231
OGRH01024694
144660
Actinomycetota
TAC
Val
>WENV181778436
OGRH01064765
95593
Actinomycetota
>WENV181778209
OGRH01021071
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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