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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181777242
OGRH01000004
235097
Bacteroidota
TTT
Lys
>WENV181777372
OGRH01000167
235097
Bacteroidota
TTT
Lys
>WENV181777419
OGRH01000280
235097
Bacteroidota
TTT
Lys
>WENV181777240
OGRH01000003
141635
Bacteroidota
TAC
Val
>WENV181777241
OGRH01000003
141635
Bacteroidota
TAC
Val
>WENV181777793
OGRH01003048
235102
Bacteroidota
CGT
Thr
>WENV181777468
OGRH01000408
243025
Bacteroidota
CAT
Met
>WENV181777320
OGRH01000072
338155
Bacteroidota
CTC
Glu
>WENV181778324
OGRH01033685
153993
Bacteroidota
GAT
Ile
>WENV181778031
OGRH01011335
343138
Bacteroidota
CCT
Arg
>WENV181777809
OGRH01003424
58715
Bacteroidota
GAG
Leu
>WENV181778289
OGRH01030411
338486
Bacteroidota
CAT
Met
>WENV181777367
OGRH01000162
411543
Bacteroidota
CTG
Gln
>WENV181777861
OGRH01004374
59689
Bacteroidota
CAG
Leu
>WENV181777301
OGRH01000049
436206
Bacteroidota
TTG
Gln
>WENV181777302
OGRH01000050
436206
Bacteroidota
TTG
Gln
>WENV181777642
OGRH01001260
436206
Bacteroidota
TTG
Gln
>WENV181777794
OGRH01003076
20893
Bacteroidota
GGA
Ser
>WENV181778375
OGRH01042794
344692
Bacteroidota
GGT
Thr
>WENV181777314
OGRH01000065
145504
Bacteroidota
TGT
Thr
>WENV181777323
OGRH01000077
338124
Bacteroidota
CCG
Arg
>WENV181778041
OGRH01011814
238121
Bacteroidota
CTT
Lys
>WENV181777618
OGRH01001033
126641
Bacteroidota
TAC
Val
>WENV181777252
OGRH01000008
338132
Bacteroidota
GCA
Cys
>WENV181777337
OGRH01000110
338132
Bacteroidota
GCA
Cys
>WENV181777355
OGRH01000135
338132
Bacteroidota
GCA
Cys
>WENV181777743
OGRH01002282
338132
Bacteroidota
GCA
Cys
>WENV181777529
OGRH01000626
235165
Bacteroidota
CCA
Trp
>WENV181777631
OGRH01001157
301449
Bacteroidota
CGG
Pro
>WENV181777366
OGRH01000160
144933
Bacteroidota
TCT
Arg
>WENV181778033
OGRH01011337
144933
Bacteroidota
TCT
Arg
>WENV181777307
OGRH01000059
303954
Bacteroidota
GCC
Gly
>WENV181777308
OGRH01000059
303954
Bacteroidota
GCC
Gly
>WENV181777525
OGRH01000626
303954
Bacteroidota
GCC
Gly
>WENV181777379
OGRH01000184
144656
Bacteroidota
GTG
His
>WENV181777243
OGRH01000004
235207
Bacteroidota
CAT
Met
>WENV181777364
OGRH01000149
143169
Bacteroidota
GGG
Pro
>WENV181777368
OGRH01000162
143169
Bacteroidota
GGG
Pro
>WENV181778096
OGRH01014688
235180
Bacteroidota
CCA
Trp
>WENV181777349
OGRH01000131
144596
Bacteroidota
GGC
Ala
>WENV181777437
OGRH01000324
80607
Bacteroidota
GTA
Tyr
>WENV181777700
OGRH01001681
80607
Bacteroidota
GTA
Tyr
>WENV181777546
OGRH01000698
80614
Bacteroidota
>WENV181777576
OGRH01000828
154643
Bacteroidota
CAT
Met
>WENV181777939
OGRH01006605
154643
Bacteroidota
CAT
Met
>WENV181777352
OGRH01000133
144590
Bacteroidota
GTT
Asn
>WENV181777523
OGRH01000618
95559
Bacteroidota
TAG
Leu
>WENV181777890
OGRH01005140
144655
Bacteroidota
GGC
Ala
>WENV181777294
OGRH01000040
144639
Bacteroidota
GGC
Ala
>WENV181778032
OGRH01011335
338164
Bacteroidota
TTC
Glu
>WENV181778244
OGRH01025374
95875
Bacteroidota
TAG
Leu
>WENV181777929
OGRH01006141
240012
Bacteroidota
CCC
Gly
>WENV181777393
OGRH01000213
150485
Bacteroidota
GTT
Asn
>WENV181777394
OGRH01000213
150485
Bacteroidota
GTT
Asn
>WENV181777810
OGRH01003453
411550
Bacteroidota
CTG
Gln
>WENV181777534
OGRH01000645
425638
Bacteroidota
CTG
Gln
>WENV181777776
OGRH01002798
425638
Bacteroidota
CTG
Gln
>WENV181777442
OGRH01000335
239647
Bacteroidota
TTT
Lys
>WENV181777527
OGRH01000626
94703
Bacteroidota
GTA
Tyr
>WENV181777638
OGRH01001220
94703
Bacteroidota
GTA
Tyr
>WENV181777506
OGRH01000545
353927
Bacteroidota
TTC
Glu
>WENV181777863
OGRH01004386
353927
Bacteroidota
TTC
Glu
>WENV181777842
OGRH01004017
185921
Bacteroidota
GTC
Asp
>WENV181777319
OGRH01000072
23696
Bacteroidota
GCT
Ser
>WENV181777438
OGRH01000332
414426
Bacteroidota
CTG
Gln
>WENV181777664
OGRH01001405
56823
Bacteroidota
TGA
Ser
>WENV181777261
OGRH01000015
16224
Bacteroidota
GGA
Ser
>WENV181777409
OGRH01000254
16224
Bacteroidota
GGA
Ser
>WENV181778013
OGRH01010417
151960
Bacteroidota
GGC
Ala
>WENV181777376
OGRH01000173
16220
Bacteroidota
GGA
Ser
>WENV181777266
OGRH01000017
338125
Bacteroidota
CCT
Arg
>WENV181777901
OGRH01005406
235129
Bacteroidota
GCC
Gly
>WENV181777497
OGRH01000518
313363
Bacteroidota
GAA
Phe
>WENV181777356
OGRH01000137
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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