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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181782082
OGRK01002717
119475
Actinomycetota
TAA
Leu
>WENV181782110
OGRK01003081
235347
Actinomycetota
GGC
Ala
>WENV181782220
OGRK01005579
235153
Actinomycetota
CCT
Arg
>WENV181782048
OGRK01002274
144589
Actinomycetota
ACG
Arg
>WENV181782113
OGRK01003158
37070
Actinomycetota
CGA
Ser
>WENV181782206
OGRK01005301
235092
Actinomycetota
CCG
Arg
>WENV181782044
OGRK01002200
245301
Actinomycetota
GCC
Gly
>WENV181782111
OGRK01003124
16219
Actinomycetota
GCT
Ser
>WENV181782109
OGRK01003081
235174
Actinomycetota
TGC
Ala
>WENV181782146
OGRK01003811
235101
Actinomycetota
TTT
Lys
>WENV181782323
OGRK01008314
144625
Actinomycetota
GTC
Asp
>WENV181782558
OGRK01029485
153948
Actinomycetota
GGG
Pro
>WENV181782098
OGRK01002986
198659
Actinomycetota
TAC
Val
>WENV181782149
OGRK01003876
16223
Actinomycetota
GAG
Leu
>WENV181782203
OGRK01005280
144593
Actinomycetota
TAT
Ile
>WENV181782475
OGRK01020214
144636
Actinomycetota
GAT
Ile
>WENV181782282
OGRK01007215
98279
Actinomycetota
GTA
Tyr
>WENV181782296
OGRK01007634
338148
Actinomycetota
CTG
Gln
>WENV181782060
OGRK01002476
235148
Actinomycetota
GTT
Asn
>WENV181782252
OGRK01006411
235148
Actinomycetota
GTT
Asn
>WENV181782083
OGRK01002753
176456
Actinomycetota
TCT
Arg
>WENV181782185
OGRK01004902
338139
Actinomycetota
GTT
Asn
>WENV181782292
OGRK01007560
411554
Actinomycetota
CCC
Gly
>WENV181782195
OGRK01005085
113601
Actinomycetota
TAG
Leu
>WENV181781853
OGRK01000765
144595
Actinomycetota
CAA
Leu
>WENV181782042
OGRK01002182
145343
Actinomycetota
GGG
Pro
>WENV181781961
OGRK01001411
414234
Actinomycetota
CTG
Gln
>WENV181782378
OGRK01011901
91808
Actinomycetota
CAG
Leu
>WENV181782194
OGRK01005085
235121
Actinomycetota
CGT
Thr
>WENV181782389
OGRK01012624
393408
Actinomycetota
TTC
Glu
>WENV181781854
OGRK01000765
144635
Actinomycetota
TGG
Pro
>WENV181782145
OGRK01003809
44851
Actinomycetota
TGA
Ser
>WENV181782172
OGRK01004506
158513
Actinomycetota
TGG
Pro
>WENV181781990
OGRK01001649
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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