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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181794368
OGRS01000360
235097
Bacteroidota
TTT
Lys
>WENV181794451
OGRS01000608
235102
Bacteroidota
CGT
Thr
>WENV181794470
OGRS01000692
338155
Bacteroidota
CTC
Glu
>WENV181794110
OGRS01000022
95618
Bacteroidota
TAG
Leu
>WENV181794087
OGRS01000005
48053
Bacteroidota
TGA
Ser
>WENV181794088
OGRS01000005
48053
Bacteroidota
TGA
Ser
>WENV181794182
OGRS01000083
48053
Bacteroidota
TGA
Ser
>WENV181794667
OGRS01001497
48053
Bacteroidota
TGA
Ser
>WENV181794911
OGRS01005720
48053
Bacteroidota
TGA
Ser
>WENV181794589
OGRS01001037
415410
Bacteroidota
TTG
Gln
>WENV181794085
OGRS01000004
411543
Bacteroidota
CTG
Gln
>WENV181794207
OGRS01000107
235182
Bacteroidota
>WENV181794294
OGRS01000205
338124
Bacteroidota
CCG
Arg
>WENV181794089
OGRS01000005
338132
Bacteroidota
GCA
Cys
>WENV181794167
OGRS01000070
338132
Bacteroidota
GCA
Cys
>WENV181794168
OGRS01000070
338132
Bacteroidota
GCA
Cys
>WENV181794541
OGRS01000868
338132
Bacteroidota
GCA
Cys
>WENV181794113
OGRS01000023
144688
Bacteroidota
CAT
Met
>WENV181794096
OGRS01000008
144933
Bacteroidota
TCT
Arg
>WENV181794183
OGRS01000084
149691
Bacteroidota
GTT
Asn
>WENV181794184
OGRS01000084
149691
Bacteroidota
GTT
Asn
>WENV181794144
OGRS01000049
144656
Bacteroidota
GTG
His
>WENV181794402
OGRS01000457
144656
Bacteroidota
GTG
His
>WENV181794335
OGRS01000284
235207
Bacteroidota
CAT
Met
>WENV181794460
OGRS01000637
235207
Bacteroidota
CAT
Met
>WENV181794461
OGRS01000637
235207
Bacteroidota
CAT
Met
>WENV181794083
OGRS01000003
144596
Bacteroidota
GGC
Ala
>WENV181794101
OGRS01000014
80607
Bacteroidota
GTA
Tyr
>WENV181794678
OGRS01001556
80607
Bacteroidota
GTA
Tyr
>WENV181794229
OGRS01000126
95559
Bacteroidota
TAG
Leu
>WENV181794271
OGRS01000174
419272
Bacteroidota
CTG
Gln
>WENV181794399
OGRS01000446
144655
Bacteroidota
GGC
Ala
>WENV181794114
OGRS01000023
338314
Bacteroidota
CCT
Arg
>WENV181794452
OGRS01000615
150485
Bacteroidota
GTT
Asn
>WENV181794453
OGRS01000615
150485
Bacteroidota
GTT
Asn
>WENV181794454
OGRS01000615
150485
Bacteroidota
GTT
Asn
>WENV181794471
OGRS01000694
150485
Bacteroidota
GTT
Asn
>WENV181794472
OGRS01000694
150485
Bacteroidota
GTT
Asn
>WENV181794473
OGRS01000694
150485
Bacteroidota
GTT
Asn
>WENV181794403
OGRS01000457
16224
Bacteroidota
GGA
Ser
>WENV181794377
OGRS01000376
16220
Bacteroidota
GGA
Ser
>WENV181794337
OGRS01000289
338125
Bacteroidota
CCT
Arg
>WENV181794442
OGRS01000571
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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