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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181812159
OGTB01000122
119661
Verrucomicrobiota
CAA
Leu
>WENV181812006
OGTB01000001
155256
Verrucomicrobiota
TCT
Arg
>WENV181812005
OGTB01000001
246701
Verrucomicrobiota
TTT
Lys
>WENV181812559
OGTB01001928
345141
Verrucomicrobiota
TTG
Gln
>WENV181812257
OGTB01000334
345133
Verrucomicrobiota
GAC
Val
>WENV181812097
OGTB01000035
82054
Verrucomicrobiota
GTA
Tyr
>WENV181812175
OGTB01000136
246677
Verrucomicrobiota
CTT
Lys
>WENV181812061
OGTB01000014
344844
Verrucomicrobiota
GCA
Cys
>WENV181812079
OGTB01000026
155264
Verrucomicrobiota
GGG
Pro
>WENV181812125
OGTB01000069
344845
Verrucomicrobiota
CTG
Gln
>WENV181812124
OGTB01000069
128202
Verrucomicrobiota
GTC
Asp
>WENV181812369
OGTB01000626
128202
Verrucomicrobiota
GTC
Asp
>WENV181812422
OGTB01000892
414625
Verrucomicrobiota
CCC
Gly
>WENV181812117
OGTB01000062
46246
Verrucomicrobiota
TGA
Ser
>WENV181812254
OGTB01000326
97755
Verrucomicrobiota
TAG
Leu
>WENV181812062
OGTB01000014
246700
Verrucomicrobiota
TTC
Glu
>WENV181812119
OGTB01000062
246700
Verrucomicrobiota
TTC
Glu
>WENV181812427
OGTB01000925
246687
Verrucomicrobiota
CGC
Ala
>WENV181812421
OGTB01000892
419909
Verrucomicrobiota
TCC
Gly
>WENV181812109
OGTB01000049
344841
Verrucomicrobiota
CAC
Val
>WENV181812160
OGTB01000122
82056
Verrucomicrobiota
TAA
Leu
>WENV181812174
OGTB01000136
344842
Verrucomicrobiota
CGT
Thr
>WENV181812055
OGTB01000012
170105
Verrucomicrobiota
CAT
Met
>WENV181812136
OGTB01000080
287733
Verrucomicrobiota
CCA
Trp
>WENV181812063
OGTB01000014
345123
Verrucomicrobiota
TGT
Thr
>WENV181812127
OGTB01000072
345110
Verrucomicrobiota
CCT
Arg
>WENV181812120
OGTB01000062
344839
Verrucomicrobiota
GTG
His
>WENV181812126
OGTB01000071
7274
Verrucomicrobiota
CGA
Ser
>WENV181812161
OGTB01000122
246260
Verrucomicrobiota
>WENV181812176
OGTB01000136
155268
Verrucomicrobiota
CGG
Pro
>WENV181812060
OGTB01000014
82181
Verrucomicrobiota
AAG
Leu
>WENV181812080
OGTB01000026
246728
Verrucomicrobiota
GAA
Phe
>WENV181812162
OGTB01000122
7256
Verrucomicrobiota
GCT
Ser
>WENV181812122
OGTB01000062
345115
Verrucomicrobiota
CAT
Met
>WENV181812258
OGTB01000334
345119
Verrucomicrobiota
TAC
Val
>WENV181812096
OGTB01000035
345124
Verrucomicrobiota
GTT
Asn
>WENV181812134
OGTB01000080
17023
Verrucomicrobiota
GGA
Ser
>WENV181812108
OGTB01000049
368497
Verrucomicrobiota
GCC
Gly
>WENV181812118
OGTB01000062
368497
Verrucomicrobiota
GCC
Gly
>WENV181812007
OGTB01000001
345142
Verrucomicrobiota
CCG
Arg
>WENV181812121
OGTB01000062
246709
Verrucomicrobiota
CAT
Met
>WENV181812081
OGTB01000026
154693
Verrucomicrobiota
TGG
Pro
>WENV181812135
OGTB01000080
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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