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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181821540
OGUF01000025
235097
Bacteroidota
TTT
Lys
>WENV181821577
OGUF01000074
235097
Bacteroidota
TTT
Lys
>WENV181821701
OGUF01000401
235097
Bacteroidota
TTT
Lys
>WENV181821728
OGUF01000580
235097
Bacteroidota
TTT
Lys
>WENV181821658
OGUF01000267
235102
Bacteroidota
CGT
Thr
>WENV181821913
OGUF01004924
144657
Bacteroidota
CGG
Pro
>WENV181822132
OGUF01035252
338155
Bacteroidota
CTC
Glu
>WENV181822090
OGUF01025562
153993
Bacteroidota
GAT
Ile
>WENV181821905
OGUF01004618
343138
Bacteroidota
CCT
Arg
>WENV181821879
OGUF01003522
46165
Bacteroidota
TGA
Ser
>WENV181821961
OGUF01006836
338486
Bacteroidota
CAT
Met
>WENV181821568
OGUF01000055
415410
Bacteroidota
TTG
Gln
>WENV181821685
OGUF01000351
415410
Bacteroidota
TTG
Gln
>WENV181821710
OGUF01000484
415410
Bacteroidota
TTG
Gln
>WENV181821962
OGUF01006915
59689
Bacteroidota
CAG
Leu
>WENV181821656
OGUF01000262
338124
Bacteroidota
CCG
Arg
>WENV181822025
OGUF01012988
235203
Bacteroidota
TTT
Lys
>WENV181821529
OGUF01000010
338132
Bacteroidota
GCA
Cys
>WENV181821609
OGUF01000128
338132
Bacteroidota
GCA
Cys
>WENV181821681
OGUF01000332
338132
Bacteroidota
GCA
Cys
>WENV181821771
OGUF01000997
338132
Bacteroidota
GCA
Cys
>WENV181821871
OGUF01003065
338132
Bacteroidota
GCA
Cys
>WENV181821590
OGUF01000095
144656
Bacteroidota
GTG
His
>WENV181821554
OGUF01000046
235207
Bacteroidota
CAT
Met
>WENV181822026
OGUF01013117
144659
Bacteroidota
GTG
His
>WENV181821914
OGUF01004924
235180
Bacteroidota
CCA
Trp
>WENV181821560
OGUF01000050
144596
Bacteroidota
GGC
Ala
>WENV181821622
OGUF01000156
144596
Bacteroidota
GGC
Ala
>WENV181821674
OGUF01000298
80607
Bacteroidota
GTA
Tyr
>WENV181821780
OGUF01001125
80607
Bacteroidota
GTA
Tyr
>WENV181821581
OGUF01000084
52358
Bacteroidota
TGA
Ser
>WENV181821689
OGUF01000363
52358
Bacteroidota
TGA
Ser
>WENV181821781
OGUF01001166
52358
Bacteroidota
TGA
Ser
>WENV181821756
OGUF01000885
144590
Bacteroidota
GTT
Asn
>WENV181821757
OGUF01000885
144590
Bacteroidota
GTT
Asn
>WENV181821606
OGUF01000117
95559
Bacteroidota
TAG
Leu
>WENV181821548
OGUF01000036
419272
Bacteroidota
CTG
Gln
>WENV181821556
OGUF01000049
144655
Bacteroidota
GGC
Ala
>WENV181822003
OGUF01010382
338164
Bacteroidota
TTC
Glu
>WENV181822122
OGUF01032536
338314
Bacteroidota
CCT
Arg
>WENV181822043
OGUF01015857
240012
Bacteroidota
CCC
Gly
>WENV181821874
OGUF01003197
147439
Bacteroidota
TCT
Arg
>WENV181821924
OGUF01005310
411550
Bacteroidota
CTG
Gln
>WENV181821585
OGUF01000087
132360
Bacteroidota
GGG
Pro
>WENV181821604
OGUF01000112
132360
Bacteroidota
GGG
Pro
>WENV181821672
OGUF01000293
132360
Bacteroidota
GGG
Pro
>WENV181821709
OGUF01000483
132360
Bacteroidota
GGG
Pro
>WENV181821539
OGUF01000023
425638
Bacteroidota
CTG
Gln
>WENV181821624
OGUF01000159
425638
Bacteroidota
CTG
Gln
>WENV181821750
OGUF01000786
425638
Bacteroidota
CTG
Gln
>WENV181821880
OGUF01003525
185921
Bacteroidota
GTC
Asp
>WENV181822131
OGUF01035252
23696
Bacteroidota
GCT
Ser
>WENV181821591
OGUF01000095
16224
Bacteroidota
GGA
Ser
>WENV181821688
OGUF01000363
16224
Bacteroidota
GGA
Ser
>WENV181821549
OGUF01000036
16220
Bacteroidota
GGA
Ser
>WENV181821807
OGUF01001467
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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