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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181822323
OGUG01000908
235097
Bacteroidota
TTT
Lys
>WENV181822650
OGUG01026513
235102
Bacteroidota
CGT
Thr
>WENV181822347
OGUG01001139
436206
Bacteroidota
TTG
Gln
>WENV181822495
OGUG01005699
338124
Bacteroidota
CCG
Arg
>WENV181822325
OGUG01000921
144656
Bacteroidota
GTG
His
>WENV181822660
OGUG01030043
235207
Bacteroidota
CAT
Met
>WENV181822267
OGUG01000534
80607
Bacteroidota
GTA
Tyr
>WENV181822374
OGUG01001502
52358
Bacteroidota
TGA
Ser
>WENV181822376
OGUG01001553
52358
Bacteroidota
TGA
Ser
>WENV181822622
OGUG01021714
52358
Bacteroidota
TGA
Ser
>WENV181822192
OGUG01000140
144590
Bacteroidota
GTT
Asn
>WENV181822215
OGUG01000221
95559
Bacteroidota
TAG
Leu
>WENV181822142
OGUG01000015
419272
Bacteroidota
CTG
Gln
>WENV181822289
OGUG01000665
144655
Bacteroidota
GGC
Ala
>WENV181822143
OGUG01000015
139743
Bacteroidota
GGG
Pro
>WENV181822429
OGUG01003145
139743
Bacteroidota
GGG
Pro
>WENV181822406
OGUG01002233
150485
Bacteroidota
GTT
Asn
>WENV181822606
OGUG01018673
425638
Bacteroidota
CTG
Gln
>WENV181822310
OGUG01000745
16224
Bacteroidota
GGA
Ser
>WENV181822224
OGUG01000272
16220
Bacteroidota
GGA
Ser
>WENV181822231
OGUG01000303
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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