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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181828104
OGUM01052038
196621
Bacillota
GTC
Asp
>WENV181827250
OGUM01001229
144612
Bacillota
TCT
Arg
>WENV181827759
OGUM01010962
144612
Bacillota
TCT
Arg
>WENV181827363
OGUM01001966
235098
Bacillota
GAC
Val
>WENV181827559
OGUM01004592
235098
Bacillota
GAC
Val
>WENV181827422
OGUM01002562
44854
Bacillota
TGA
Ser
>WENV181827457
OGUM01002919
304022
Bacillota
GCC
Gly
>WENV181827610
OGUM01005676
304022
Bacillota
GCC
Gly
>WENV181828069
OGUM01042833
307003
Bacillota
TGC
Ala
>WENV181827273
OGUM01001327
238910
Bacillota
CTT
Lys
>WENV181827904
OGUM01018638
235150
Bacillota
TGC
Ala
>WENV181828012
OGUM01031675
235294
Bacillota
TGC
Ala
>WENV181827741
OGUM01010220
340802
Bacillota
TTG
Gln
>WENV181827897
OGUM01017639
293599
Bacillota
CTT
Lys
>WENV181827876
OGUM01016380
429429
Bacillota
CCA
Trp
>WENV181827340
OGUM01001738
11034
Bacillota
GGA
Ser
>WENV181826935
OGUM01000128
235079
Bacillota
GAA
Phe
>WENV181827834
OGUM01013319
144763
Bacillota
TGG
Pro
>WENV181827749
OGUM01010634
173314
Bacillota
GAT
Ile
>WENV181828153
OGUM01065138
338149
Bacillota
CTC
Glu
>WENV181827531
OGUM01004176
245298
Bacillota
CGG
Pro
>WENV181828021
OGUM01033031
413152
Bacillota
TCC
Gly
>WENV181827845
OGUM01014113
152149
Bacillota
GTG
His
>WENV181827919
OGUM01019758
162445
Bacillota
CAT
Met
>WENV181828140
OGUM01061007
201704
Bacillota
GAT
Ile
>WENV181827896
OGUM01017614
152492
Bacillota
GGG
Pro
>WENV181828036
OGUM01035717
162254
Bacillota
ACG
Arg
>WENV181826907
OGUM01000082
235078
Bacillota
TAC
Val
>WENV181828107
OGUM01052606
153911
Bacillota
GAT
Ile
>WENV181827740
OGUM01010220
144610
Bacillota
GTG
His
>WENV181826908
OGUM01000082
240017
Bacillota
GCC
Gly
>WENV181827169
OGUM01000796
411547
Bacillota
CTG
Gln
>WENV181827530
OGUM01004176
411547
Bacillota
CTG
Gln
>WENV181828043
OGUM01037122
147684
Bacillota
ACG
Arg
>WENV181827423
OGUM01002562
4624
Bacillota
GCT
Ser
>WENV181827918
OGUM01019567
412387
Bacillota
GCA
Cys
>WENV181828105
OGUM01052038
235095
Bacillota
GGT
Thr
>WENV181827248
OGUM01001217
253195
Bacillota
TTT
Lys
>WENV181828072
OGUM01043267
235289
Bacillota
GTT
Asn
>WENV181827723
OGUM01009601
411549
Bacillota
TTG
Gln
>WENV181827835
OGUM01013319
144767
Bacillota
GTG
His
>WENV181827393
OGUM01002184
148188
Bacillota
CCG
Arg
>WENV181827510
OGUM01003819
148188
Bacillota
CCG
Arg
>WENV181827219
OGUM01001034
80612
Bacillota
GTA
Tyr
>WENV181827496
OGUM01003548
243401
Bacillota
CGT
Thr
>WENV181826968
OGUM01000162
163943
Bacillota
GTC
Asp
>WENV181828090
OGUM01048713
235638
Bacillota
GAA
Phe
>WENV181827308
OGUM01001485
235124
Bacillota
TGG
Pro
>WENV181827673
OGUM01007319
338129
Bacillota
TGT
Thr
>WENV181826916
OGUM01000104
157838
Bacillota
GTC
Asp
>WENV181827438
OGUM01002609
144583
Bacillota
ACG
Arg
>WENV181828103
OGUM01052038
235171
Bacillota
CCA
Trp
>WENV181827577
OGUM01005041
144621
Bacillota
GTT
Asn
>WENV181827252
OGUM01001229
58712
Bacillota
CAG
Leu
>WENV181827775
OGUM01011374
245296
Bacillota
CCC
Gly
>WENV181828154
OGUM01065138
272992
Bacillota
CTT
Lys
>WENV181827380
OGUM01002113
178024
Bacillota
TCT
Arg
>WENV181827739
OGUM01010220
157635
Bacillota
TCT
Arg
>WENV181827748
OGUM01010634
299139
Bacillota
TGC
Ala
>WENV181827258
OGUM01001246
144594
Bacillota
CAC
Val
>WENV181827328
OGUM01001619
413179
Bacillota
CCC
Gly
>WENV181827558
OGUM01004587
263523
Bacillota
TAC
Val
>WENV181827221
OGUM01001046
338128
Bacillota
TTC
Glu
>WENV181827772
OGUM01011225
338128
Bacillota
TTC
Glu
>WENV181827854
OGUM01014638
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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