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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
94 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181829409
OGUN01017401
24650
Bacillota
TAA
Leu
>WENV181829603
OGUN01031642
155958
Bacillota
GAT
Ile
>WENV181829717
OGUN01050901
158247
Bacillota
>WENV181828425
OGUN01000251
37213
Bacillota
TGA
Ser
>WENV181828759
OGUN01001707
144612
Bacillota
TCT
Arg
>WENV181829700
OGUN01046407
154063
Bacillota
CGG
Pro
>WENV181828480
OGUN01000414
235134
Bacillota
GAA
Phe
>WENV181828755
OGUN01001676
339890
Bacillota
TTG
Gln
>WENV181829101
OGUN01005740
235098
Bacillota
GAC
Val
>WENV181829169
OGUN01007531
235098
Bacillota
GAC
Val
>WENV181829654
OGUN01039524
235098
Bacillota
GAC
Val
>WENV181829785
OGUN01064591
338152
Bacillota
TTC
Glu
>WENV181829012
OGUN01004360
148239
Bacillota
TCT
Arg
>WENV181829050
OGUN01004833
148239
Bacillota
TCT
Arg
>WENV181829399
OGUN01016904
44854
Bacillota
TGA
Ser
>WENV181829406
OGUN01017133
44854
Bacillota
TGA
Ser
>WENV181829395
OGUN01016530
235154
Bacillota
GTT
Asn
>WENV181829723
OGUN01051593
235154
Bacillota
GTT
Asn
>WENV181828911
OGUN01003056
37071
Bacillota
TGA
Ser
>WENV181828389
OGUN01000185
59312
Bacillota
CAG
Leu
>WENV181829317
OGUN01013098
59312
Bacillota
CAG
Leu
>WENV181829693
OGUN01045727
238910
Bacillota
CTT
Lys
>WENV181828881
OGUN01002737
245370
Bacillota
TGT
Thr
>WENV181828448
OGUN01000312
338147
Bacillota
CTC
Glu
>WENV181828768
OGUN01001758
338147
Bacillota
CTC
Glu
>WENV181829718
OGUN01051013
235150
Bacillota
TGC
Ala
>WENV181829628
OGUN01034694
155273
Bacillota
CAT
Met
>WENV181829014
OGUN01004360
340802
Bacillota
TTG
Gln
>WENV181829193
OGUN01008044
41154
Bacillota
TAA
Leu
>WENV181829110
OGUN01005986
44859
Bacillota
AAG
Leu
>WENV181829189
OGUN01007917
11034
Bacillota
GGA
Ser
>WENV181829456
OGUN01019363
11034
Bacillota
GGA
Ser
>WENV181829013
OGUN01004360
156937
Bacillota
GTG
His
>WENV181829051
OGUN01004833
156937
Bacillota
GTG
His
>WENV181828380
OGUN01000175
274189
Bacillota
TGT
Thr
>WENV181829359
OGUN01014706
162028
Bacillota
ACG
Arg
>WENV181828598
OGUN01000824
338149
Bacillota
CTC
Glu
>WENV181829390
OGUN01016315
245298
Bacillota
CGG
Pro
>WENV181828927
OGUN01003181
37269
Bacillota
TGA
Ser
>WENV181828216
OGUN01000013
287000
Bacillota
GTT
Asn
>WENV181828217
OGUN01000013
287000
Bacillota
GTT
Asn
>WENV181829336
OGUN01013853
152492
Bacillota
GGG
Pro
>WENV181829720
OGUN01051022
144610
Bacillota
GTG
His
>WENV181828212
OGUN01000009
240017
Bacillota
GCC
Gly
>WENV181828976
OGUN01003692
411547
Bacillota
CTG
Gln
>WENV181829389
OGUN01016315
411547
Bacillota
CTG
Gln
>WENV181829400
OGUN01016904
4624
Bacillota
GCT
Ser
>WENV181829407
OGUN01017133
4624
Bacillota
GCT
Ser
>WENV181828193
OGUN01000003
263765
Bacillota
TAC
Val
>WENV181828211
OGUN01000009
263765
Bacillota
TAC
Val
>WENV181829124
OGUN01006245
412387
Bacillota
GCA
Cys
>WENV181829030
OGUN01004539
235095
Bacillota
GGT
Thr
>WENV181829276
OGUN01011202
241471
Bacillota
TGC
Ala
>WENV181829358
OGUN01014706
37193
Bacillota
TAA
Leu
>WENV181828840
OGUN01002381
411549
Bacillota
TTG
Gln
>WENV181829103
OGUN01005798
235142
Bacillota
CTT
Lys
>WENV181828516
OGUN01000544
245386
Bacillota
CCA
Trp
>WENV181829152
OGUN01006936
148188
Bacillota
CCG
Arg
>WENV181829698
OGUN01046391
80612
Bacillota
GTA
Tyr
>WENV181829809
OGUN01069695
235127
Bacillota
TTT
Lys
>WENV181829662
OGUN01040400
163943
Bacillota
GTC
Asp
>WENV181828478
OGUN01000414
249522
Bacillota
TAC
Val
>WENV181829725
OGUN01051593
241432
Bacillota
TGT
Thr
>WENV181829227
OGUN01008765
235124
Bacillota
TGG
Pro
>WENV181829342
OGUN01014137
235124
Bacillota
TGG
Pro
>WENV181828726
OGUN01001479
338129
Bacillota
TGT
Thr
>WENV181829420
OGUN01017712
338129
Bacillota
TGT
Thr
>WENV181829472
OGUN01020140
157838
Bacillota
GTC
Asp
>WENV181829128
OGUN01006395
144583
Bacillota
ACG
Arg
>WENV181828918
OGUN01003141
238974
Bacillota
GAA
Phe
>WENV181828599
OGUN01000824
144621
Bacillota
GTT
Asn
>WENV181828956
OGUN01003537
144621
Bacillota
GTT
Asn
>WENV181829344
OGUN01014237
144621
Bacillota
GTT
Asn
>WENV181828884
OGUN01002737
243098
Bacillota
GGT
Thr
>WENV181828727
OGUN01001497
58712
Bacillota
CAG
Leu
>WENV181829437
OGUN01018119
58712
Bacillota
CAG
Leu
>WENV181829002
OGUN01004264
245296
Bacillota
CCC
Gly
>WENV181829205
OGUN01008203
245296
Bacillota
CCC
Gly
>WENV181829034
OGUN01004615
344240
Bacillota
GCC
Gly
>WENV181828879
OGUN01002721
248965
Bacillota
GCC
Gly
>WENV181828933
OGUN01003234
248965
Bacillota
GCC
Gly
>WENV181829393
OGUN01016425
144594
Bacillota
CAC
Val
>WENV181828854
OGUN01002477
95563
Bacillota
GTA
Tyr
>WENV181828442
OGUN01000297
338127
Bacillota
TTG
Gln
>WENV181828444
OGUN01000302
272488
Bacillota
GAA
Phe
>WENV181829354
OGUN01014706
146770
Bacillota
TTC
Glu
>WENV181828312
OGUN01000095
238945
Bacillota
GCC
Gly
>WENV181829123
OGUN01006211
238945
Bacillota
GCC
Gly
>WENV181828988
OGUN01004039
338128
Bacillota
TTC
Glu
>WENV181829038
OGUN01004678
338128
Bacillota
TTC
Glu
>WENV181829243
OGUN01009353
338128
Bacillota
TTC
Glu
>WENV181829524
OGUN01025574
338128
Bacillota
TTC
Glu
>WENV181829531
OGUN01026024
338128
Bacillota
TTC
Glu
>WENV181828631
OGUN01000917
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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