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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181867687
OGWW01001138
196621
Bacillota
GTC
Asp
>WENV181867544
OGWW01000373
309417
Bacillota
GGC
Ala
>WENV181868115
OGWW01021823
37213
Bacillota
TGA
Ser
>WENV181867860
OGWW01003116
144612
Bacillota
TCT
Arg
>WENV181867827
OGWW01002673
267649
Bacillota
TAC
Val
>WENV181868190
OGWW01032921
235098
Bacillota
GAC
Val
>WENV181867626
OGWW01000752
340263
Bacillota
TTC
Glu
>WENV181867614
OGWW01000680
340263
Bacillota
TTC
Glu
>WENV181868098
OGWW01019664
23769
Bacillota
TAA
Leu
>WENV181867747
OGWW01001657
148239
Bacillota
TCT
Arg
>WENV181867698
OGWW01001186
44854
Bacillota
TGA
Ser
>WENV181867619
OGWW01000752
148348
Bacillota
GTC
Asp
>WENV181867627
OGWW01000764
304022
Bacillota
GCC
Gly
>WENV181868135
OGWW01024619
429443
Bacillota
GCA
Cys
>WENV181867998
OGWW01008224
246023
Bacillota
TGC
Ala
>WENV181868124
OGWW01022639
307003
Bacillota
TGC
Ala
>WENV181867737
OGWW01001618
239080
Bacillota
CTG
Gln
>WENV181867470
OGWW01000191
238910
Bacillota
CTT
Lys
>WENV181867738
OGWW01001619
338147
Bacillota
CTC
Glu
>WENV181868204
OGWW01035253
114359
Bacillota
TAG
Leu
>WENV181868132
OGWW01024090
341763
Bacillota
CTC
Glu
>WENV181867865
OGWW01003172
429429
Bacillota
CCA
Trp
>WENV181867822
OGWW01002639
313454
Bacillota
GAA
Phe
>WENV181868191
OGWW01032987
44859
Bacillota
AAG
Leu
>WENV181867465
OGWW01000182
11034
Bacillota
GGA
Ser
>WENV181867620
OGWW01000752
239076
Bacillota
GAA
Phe
>WENV181868174
OGWW01029720
247057
Bacillota
TGC
Ala
>WENV181867604
OGWW01000630
235697
Bacillota
GTT
Asn
>WENV181868168
OGWW01029089
392638
Bacillota
TGT
Thr
>WENV181867760
OGWW01001769
274189
Bacillota
TGT
Thr
>WENV181867551
OGWW01000420
235079
Bacillota
GAA
Phe
>WENV181867635
OGWW01000817
340265
Bacillota
GCC
Gly
>WENV181867656
OGWW01000905
340265
Bacillota
GCC
Gly
>WENV181868009
OGWW01009060
173314
Bacillota
GAT
Ile
>WENV181868189
OGWW01032824
338149
Bacillota
CTC
Glu
>WENV181867794
OGWW01002264
245298
Bacillota
CGG
Pro
>WENV181867997
OGWW01008224
201704
Bacillota
GAT
Ile
>WENV181868125
OGWW01023346
152492
Bacillota
GGG
Pro
>WENV181867932
OGWW01005273
100326
Bacillota
GTA
Tyr
>WENV181867748
OGWW01001657
144610
Bacillota
GTG
His
>WENV181867793
OGWW01002264
411547
Bacillota
CTG
Gln
>WENV181867867
OGWW01003182
411547
Bacillota
CTG
Gln
>WENV181867699
OGWW01001186
4624
Bacillota
GCT
Ser
>WENV181867907
OGWW01004314
263765
Bacillota
TAC
Val
>WENV181867823
OGWW01002639
313164
Bacillota
TTT
Lys
>WENV181867688
OGWW01001138
235095
Bacillota
GGT
Thr
>WENV181867710
OGWW01001240
235095
Bacillota
GGT
Thr
>WENV181867632
OGWW01000795
419639
Bacillota
GCA
Cys
>WENV181867615
OGWW01000680
304759
Bacillota
TAC
Val
>WENV181868063
OGWW01015493
411549
Bacillota
TTG
Gln
>WENV181867473
OGWW01000191
245386
Bacillota
CCA
Trp
>WENV181867892
OGWW01003696
245386
Bacillota
CCA
Trp
>WENV181867831
OGWW01002726
148188
Bacillota
CCG
Arg
>WENV181867503
OGWW01000284
298620
Bacillota
CAT
Met
>WENV181868167
OGWW01029089
235288
Bacillota
TAC
Val
>WENV181867941
OGWW01005563
235124
Bacillota
TGG
Pro
>WENV181868199
OGWW01035253
201667
Bacillota
TCT
Arg
>WENV181867755
OGWW01001720
338129
Bacillota
TGT
Thr
>WENV181868166
OGWW01029089
436750
Bacillota
TCC
Gly
>WENV181868201
OGWW01035253
279635
Bacillota
GTG
His
>WENV181868149
OGWW01026623
157838
Bacillota
GTC
Asp
>WENV181868169
OGWW01029089
108675
Bacillota
GTA
Tyr
>WENV181868035
OGWW01011982
144583
Bacillota
ACG
Arg
>WENV181868197
OGWW01034956
247734
Bacillota
TGC
Ala
>WENV181867686
OGWW01001138
235171
Bacillota
CCA
Trp
>WENV181867980
OGWW01007047
144621
Bacillota
GTT
Asn
>WENV181867461
OGWW01000176
243098
Bacillota
GGT
Thr
>WENV181868137
OGWW01025256
58712
Bacillota
CAG
Leu
>WENV181868171
OGWW01029089
144762
Bacillota
TCT
Arg
>WENV181867594
OGWW01000592
245296
Bacillota
CCC
Gly
>WENV181868022
OGWW01010386
272992
Bacillota
CTT
Lys
>WENV181867613
OGWW01000680
239078
Bacillota
TTT
Lys
>WENV181867383
OGWW01000025
344240
Bacillota
GCC
Gly
>WENV181867644
OGWW01000855
196632
Bacillota
GTC
Asp
>WENV181868257
OGWW01054157
299139
Bacillota
TGC
Ala
>WENV181867850
OGWW01002878
144594
Bacillota
CAC
Val
>WENV181867611
OGWW01000651
338127
Bacillota
TTG
Gln
>WENV181867805
OGWW01002410
414486
Bacillota
CCC
Gly
>WENV181867676
OGWW01001034
114075
Bacillota
TAG
Leu
>WENV181867936
OGWW01005393
338131
Bacillota
GCC
Gly
>WENV181867825
OGWW01002644
338128
Bacillota
TTC
Glu
>WENV181867645
OGWW01000855
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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