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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181884897
OGXJ01002874
235097
Bacteroidota
TTT
Lys
>WENV181884854
OGXJ01002501
95987
Bacteroidota
CAA
Leu
>WENV181884477
OGXJ01000392
141635
Bacteroidota
TAC
Val
>WENV181884771
OGXJ01001900
339412
Bacteroidota
GGT
Thr
>WENV181885231
OGXJ01009292
235102
Bacteroidota
CGT
Thr
>WENV181885207
OGXJ01008627
146761
Bacteroidota
GAT
Ile
>WENV181885448
OGXJ01019990
144657
Bacteroidota
CGG
Pro
>WENV181884382
OGXJ01000158
243025
Bacteroidota
CAT
Met
>WENV181884899
OGXJ01002917
338155
Bacteroidota
CTC
Glu
>WENV181885587
OGXJ01038657
153993
Bacteroidota
GAT
Ile
>WENV181885353
OGXJ01013726
343138
Bacteroidota
CCT
Arg
>WENV181885220
OGXJ01009093
46165
Bacteroidota
TGA
Ser
>WENV181884679
OGXJ01001223
17323
Bacteroidota
GGA
Ser
>WENV181884454
OGXJ01000335
338486
Bacteroidota
CAT
Met
>WENV181884989
OGXJ01004095
436206
Bacteroidota
TTG
Gln
>WENV181884986
OGXJ01003993
412479
Bacteroidota
TTG
Gln
>WENV181884928
OGXJ01003181
344692
Bacteroidota
GGT
Thr
>WENV181885219
OGXJ01009093
344692
Bacteroidota
GGT
Thr
>WENV181885446
OGXJ01019930
344692
Bacteroidota
GGT
Thr
>WENV181884791
OGXJ01001953
145504
Bacteroidota
TGT
Thr
>WENV181884958
OGXJ01003579
353373
Bacteroidota
>WENV181884343
OGXJ01000102
338124
Bacteroidota
CCG
Arg
>WENV181884990
OGXJ01004101
338124
Bacteroidota
CCG
Arg
>WENV181884614
OGXJ01000907
338132
Bacteroidota
GCA
Cys
>WENV181884774
OGXJ01001920
338132
Bacteroidota
GCA
Cys
>WENV181884826
OGXJ01002218
338132
Bacteroidota
GCA
Cys
>WENV181884846
OGXJ01002438
338132
Bacteroidota
GCA
Cys
>WENV181885035
OGXJ01004900
338132
Bacteroidota
GCA
Cys
>WENV181884524
OGXJ01000543
193809
Bacteroidota
CAT
Met
>WENV181884783
OGXJ01001933
37076
Bacteroidota
TAA
Leu
>WENV181884550
OGXJ01000622
301449
Bacteroidota
CGG
Pro
>WENV181884742
OGXJ01001612
301449
Bacteroidota
CGG
Pro
>WENV181884790
OGXJ01001948
301449
Bacteroidota
CGG
Pro
>WENV181885032
OGXJ01004806
301449
Bacteroidota
CGG
Pro
>WENV181885151
OGXJ01007166
301449
Bacteroidota
CGG
Pro
>WENV181885275
OGXJ01010522
301449
Bacteroidota
CGG
Pro
>WENV181884480
OGXJ01000399
144933
Bacteroidota
TCT
Arg
>WENV181885530
OGXJ01027821
141414
Bacteroidota
GGG
Pro
>WENV181885489
OGXJ01024238
303954
Bacteroidota
GCC
Gly
>WENV181884850
OGXJ01002468
144656
Bacteroidota
GTG
His
>WENV181884642
OGXJ01001021
235207
Bacteroidota
CAT
Met
>WENV181885435
OGXJ01018547
235180
Bacteroidota
CCA
Trp
>WENV181884749
OGXJ01001677
144596
Bacteroidota
GGC
Ala
>WENV181884837
OGXJ01002265
144596
Bacteroidota
GGC
Ala
>WENV181885118
OGXJ01006443
80607
Bacteroidota
GTA
Tyr
>WENV181885316
OGXJ01011695
80607
Bacteroidota
GTA
Tyr
>WENV181884787
OGXJ01001946
113604
Bacteroidota
>WENV181884561
OGXJ01000652
344769
Bacteroidota
CTC
Glu
>WENV181885246
OGXJ01009632
80614
Bacteroidota
>WENV181884857
OGXJ01002544
154643
Bacteroidota
CAT
Met
>WENV181885443
OGXJ01019494
144590
Bacteroidota
GTT
Asn
>WENV181885444
OGXJ01019494
144590
Bacteroidota
GTT
Asn
>WENV181885267
OGXJ01010237
144655
Bacteroidota
GGC
Ala
>WENV181885650
OGXJ01055037
95875
Bacteroidota
TAG
Leu
>WENV181885349
OGXJ01013598
240012
Bacteroidota
CCC
Gly
>WENV181885462
OGXJ01021747
147439
Bacteroidota
TCT
Arg
>WENV181885410
OGXJ01017474
411550
Bacteroidota
CTG
Gln
>WENV181884313
OGXJ01000044
425638
Bacteroidota
CTG
Gln
>WENV181884597
OGXJ01000809
425638
Bacteroidota
CTG
Gln
>WENV181884638
OGXJ01001008
425638
Bacteroidota
CTG
Gln
>WENV181884675
OGXJ01001203
425638
Bacteroidota
CTG
Gln
>WENV181884971
OGXJ01003758
425638
Bacteroidota
CTG
Gln
>WENV181884599
OGXJ01000833
239647
Bacteroidota
TTT
Lys
>WENV181884527
OGXJ01000553
19317
Bacteroidota
GGA
Ser
>WENV181884704
OGXJ01001374
353927
Bacteroidota
TTC
Glu
>WENV181885670
OGXJ01063924
353927
Bacteroidota
TTC
Glu
>WENV181884617
OGXJ01000922
414426
Bacteroidota
CTG
Gln
>WENV181884542
OGXJ01000602
56823
Bacteroidota
TGA
Ser
>WENV181884646
OGXJ01001070
56823
Bacteroidota
TGA
Ser
>WENV181884831
OGXJ01002248
56823
Bacteroidota
TGA
Ser
>WENV181884967
OGXJ01003668
56823
Bacteroidota
TGA
Ser
>WENV181884997
OGXJ01004258
56823
Bacteroidota
TGA
Ser
>WENV181885662
OGXJ01059654
16224
Bacteroidota
GGA
Ser
>WENV181885542
OGXJ01029580
151960
Bacteroidota
GGC
Ala
>WENV181885058
OGXJ01005249
16220
Bacteroidota
GGA
Ser
>WENV181885340
OGXJ01013092
235129
Bacteroidota
GCC
Gly
>WENV181885009
OGXJ01004447
313363
Bacteroidota
GAA
Phe
>WENV181884449
OGXJ01000318
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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