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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181890597
OGXO01000150
235097
Bacteroidota
TTT
Lys
>WENV181890686
OGXO01000671
235097
Bacteroidota
TTT
Lys
>WENV181891320
OGXO01013723
243025
Bacteroidota
CAT
Met
>WENV181890633
OGXO01000336
338155
Bacteroidota
CTC
Glu
>WENV181890611
OGXO01000240
17323
Bacteroidota
GGA
Ser
>WENV181890987
OGXO01003387
95618
Bacteroidota
TAG
Leu
>WENV181890650
OGXO01000412
415410
Bacteroidota
TTG
Gln
>WENV181890601
OGXO01000167
411543
Bacteroidota
CTG
Gln
>WENV181890855
OGXO01001743
411543
Bacteroidota
CTG
Gln
>WENV181891403
OGXO01018457
344692
Bacteroidota
GGT
Thr
>WENV181890693
OGXO01000715
235182
Bacteroidota
>WENV181891547
OGXO01032173
126641
Bacteroidota
TAC
Val
>WENV181890558
OGXO01000038
338132
Bacteroidota
GCA
Cys
>WENV181890583
OGXO01000087
338132
Bacteroidota
GCA
Cys
>WENV181890857
OGXO01001777
338132
Bacteroidota
GCA
Cys
>WENV181891287
OGXO01011817
144688
Bacteroidota
CAT
Met
>WENV181891004
OGXO01003561
181746
Bacteroidota
GGC
Ala
>WENV181890639
OGXO01000361
301449
Bacteroidota
CGG
Pro
>WENV181890806
OGXO01001490
144933
Bacteroidota
TCT
Arg
>WENV181890843
OGXO01001592
235207
Bacteroidota
CAT
Met
>WENV181891095
OGXO01005248
144596
Bacteroidota
GGC
Ala
>WENV181890729
OGXO01000951
80607
Bacteroidota
GTA
Tyr
>WENV181890845
OGXO01001628
52358
Bacteroidota
TGA
Ser
>WENV181890916
OGXO01002248
52358
Bacteroidota
TGA
Ser
>WENV181891073
OGXO01004808
154643
Bacteroidota
CAT
Met
>WENV181891527
OGXO01030449
338165
Bacteroidota
GGT
Thr
>WENV181890780
OGXO01001285
132360
Bacteroidota
GGG
Pro
>WENV181890940
OGXO01002594
132360
Bacteroidota
GGG
Pro
>WENV181890866
OGXO01001875
425638
Bacteroidota
CTG
Gln
>WENV181890991
OGXO01003427
414426
Bacteroidota
CTG
Gln
>WENV181890552
OGXO01000013
16224
Bacteroidota
GGA
Ser
>WENV181890629
OGXO01000319
338125
Bacteroidota
CCT
Arg
>WENV181891151
OGXO01006435
338125
Bacteroidota
CCT
Arg
>WENV181890920
OGXO01002299
411629
Bacteroidota
TTG
Gln
>WENV181891378
OGXO01016198
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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