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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181899391
OGXU01001616
24650
Bacillota
TAA
Leu
>WENV181899190
OGXU01000124
267649
Bacillota
TAC
Val
>WENV181899192
OGXU01000124
267649
Bacillota
TAC
Val
>WENV181899559
OGXU01006503
235134
Bacillota
GAA
Phe
>WENV181899715
OGXU01019804
235098
Bacillota
GAC
Val
>WENV181899723
OGXU01021267
338152
Bacillota
TTC
Glu
>WENV181899300
OGXU01000703
340263
Bacillota
TTC
Glu
>WENV181899546
OGXU01005992
340263
Bacillota
TTC
Glu
>WENV181899753
OGXU01027766
44854
Bacillota
TGA
Ser
>WENV181899302
OGXU01000703
148348
Bacillota
GTC
Asp
>WENV181899539
OGXU01005992
148348
Bacillota
GTC
Asp
>WENV181899752
OGXU01027197
246023
Bacillota
TGC
Ala
>WENV181899631
OGXU01010838
59312
Bacillota
CAG
Leu
>WENV181899424
OGXU01002352
239080
Bacillota
CTG
Gln
>WENV181899787
OGXU01036100
338147
Bacillota
CTC
Glu
>WENV181899441
OGXU01002739
155273
Bacillota
CAT
Met
>WENV181899174
OGXU01000084
338143
Bacillota
CTC
Glu
>WENV181899199
OGXU01000166
338143
Bacillota
CTC
Glu
>WENV181899710
OGXU01019046
182792
Bacillota
GTC
Asp
>WENV181899701
OGXU01018362
44859
Bacillota
AAG
Leu
>WENV181899303
OGXU01000703
239076
Bacillota
GAA
Phe
>WENV181899540
OGXU01005992
239076
Bacillota
GAA
Phe
>WENV181899372
OGXU01001376
243646
Bacillota
GTT
Asn
>WENV181899373
OGXU01001376
235697
Bacillota
GTT
Asn
>WENV181899716
OGXU01020078
235079
Bacillota
GAA
Phe
>WENV181899206
OGXU01000197
340265
Bacillota
GCC
Gly
>WENV181899218
OGXU01000236
340265
Bacillota
GCC
Gly
>WENV181899219
OGXU01000236
340265
Bacillota
GCC
Gly
>WENV181899734
OGXU01023521
338149
Bacillota
CTC
Glu
>WENV181899221
OGXU01000238
37269
Bacillota
TGA
Ser
>WENV181899452
OGXU01003007
413152
Bacillota
TCC
Gly
>WENV181899560
OGXU01006503
240017
Bacillota
GCC
Gly
>WENV181899659
OGXU01013963
411547
Bacillota
CTG
Gln
>WENV181899754
OGXU01027766
4624
Bacillota
GCT
Ser
>WENV181899222
OGXU01000238
10680
Bacillota
GGA
Ser
>WENV181899258
OGXU01000437
18852
Bacillota
GCT
Ser
>WENV181899322
OGXU01000815
18852
Bacillota
GCT
Ser
>WENV181899301
OGXU01000703
239079
Bacillota
TAC
Val
>WENV181899304
OGXU01000703
239079
Bacillota
TAC
Val
>WENV181899704
OGXU01018627
59296
Bacillota
AAG
Leu
>WENV181899153
OGXU01000042
235127
Bacillota
TTT
Lys
>WENV181899579
OGXU01007045
144672
Bacillota
TCT
Arg
>WENV181899672
OGXU01015788
247734
Bacillota
TGC
Ala
>WENV181899735
OGXU01023521
144621
Bacillota
GTT
Asn
>WENV181899761
OGXU01029223
235113
Bacillota
GAA
Phe
>WENV181899119
OGXU01000002
277200
Bacillota
GGC
Ala
>WENV181899317
OGXU01000779
243098
Bacillota
GGT
Thr
>WENV181899665
OGXU01014516
58712
Bacillota
CAG
Leu
>WENV181899632
OGXU01010952
272992
Bacillota
CTT
Lys
>WENV181899299
OGXU01000703
239078
Bacillota
TTT
Lys
>WENV181899277
OGXU01000541
344240
Bacillota
GCC
Gly
>WENV181899498
OGXU01004269
242686
Bacillota
TGC
Ala
>WENV181899759
OGXU01029223
95563
Bacillota
GTA
Tyr
>WENV181899220
OGXU01000237
338131
Bacillota
GCC
Gly
>WENV181899265
OGXU01000452
245344
Bacillota
GAA
Phe
>WENV181899758
OGXU01028782
150669
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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