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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181900491
OGXV01012527
196621
Bacillota
GTC
Asp
>WENV181900713
OGXV01037039
202812
Bacillota
CAT
Met
>WENV181899973
OGXV01000489
37213
Bacillota
TGA
Ser
>WENV181900361
OGXV01005858
144612
Bacillota
TCT
Arg
>WENV181900096
OGXV01001212
235098
Bacillota
GAC
Val
>WENV181900472
OGXV01010919
235098
Bacillota
GAC
Val
>WENV181899967
OGXV01000424
338152
Bacillota
TTC
Glu
>WENV181900441
OGXV01009419
23769
Bacillota
TAA
Leu
>WENV181900245
OGXV01003207
44854
Bacillota
TGA
Ser
>WENV181900123
OGXV01001512
235154
Bacillota
GTT
Asn
>WENV181900624
OGXV01023876
144577
Bacillota
GAT
Ile
>WENV181900125
OGXV01001512
429443
Bacillota
GCA
Cys
>WENV181900773
OGXV01049045
246023
Bacillota
TGC
Ala
>WENV181900340
OGXV01005268
155273
Bacillota
CAT
Met
>WENV181900687
OGXV01033043
235137
Bacillota
TGC
Ala
>WENV181900847
OGXV01073586
341763
Bacillota
CTC
Glu
>WENV181900538
OGXV01015881
11034
Bacillota
GGA
Ser
>WENV181900734
OGXV01040364
156937
Bacillota
GTG
His
>WENV181900497
OGXV01012834
235079
Bacillota
GAA
Phe
>WENV181900623
OGXV01023876
235087
Bacillota
TGC
Ala
>WENV181900836
OGXV01069070
149041
Bacillota
GTC
Asp
>WENV181900199
OGXV01002560
338149
Bacillota
CTC
Glu
>WENV181900455
OGXV01009798
245298
Bacillota
CGG
Pro
>WENV181900674
OGXV01030438
340131
Bacillota
GTT
Asn
>WENV181900463
OGXV01010259
155089
Bacillota
CAT
Met
>WENV181900798
OGXV01055719
413152
Bacillota
TCC
Gly
>WENV181900772
OGXV01049045
201704
Bacillota
GAT
Ile
>WENV181900149
OGXV01001767
152492
Bacillota
GGG
Pro
>WENV181900653
OGXV01027621
153911
Bacillota
GAT
Ile
>WENV181900454
OGXV01009798
411547
Bacillota
CTG
Gln
>WENV181900457
OGXV01009928
411547
Bacillota
CTG
Gln
>WENV181899943
OGXV01000342
147684
Bacillota
ACG
Arg
>WENV181900246
OGXV01003207
4624
Bacillota
GCT
Ser
>WENV181899860
OGXV01000064
263765
Bacillota
TAC
Val
>WENV181900466
OGXV01010494
235095
Bacillota
GGT
Thr
>WENV181900635
OGXV01025678
185292
Bacillota
ACG
Arg
>WENV181899964
OGXV01000403
419639
Bacillota
GCA
Cys
>WENV181900577
OGXV01018659
411549
Bacillota
TTG
Gln
>WENV181900435
OGXV01009143
245386
Bacillota
CCA
Trp
>WENV181900279
OGXV01003911
148188
Bacillota
CCG
Arg
>WENV181900697
OGXV01034871
298639
Bacillota
GTT
Asn
>WENV181900283
OGXV01004033
80612
Bacillota
GTA
Tyr
>WENV181900226
OGXV01002763
256380
Bacillota
>WENV181900787
OGXV01051763
298620
Bacillota
CAT
Met
>WENV181900061
OGXV01001048
241432
Bacillota
TGT
Thr
>WENV181900336
OGXV01005172
235124
Bacillota
TGG
Pro
>WENV181900366
OGXV01005942
338129
Bacillota
TGT
Thr
>WENV181900352
OGXV01005656
144583
Bacillota
ACG
Arg
>WENV181900029
OGXV01000800
144672
Bacillota
TCT
Arg
>WENV181900575
OGXV01018636
247734
Bacillota
TGC
Ala
>WENV181899838
OGXV01000015
419877
Bacillota
TCC
Gly
>WENV181900326
OGXV01005056
419877
Bacillota
TCC
Gly
>WENV181900490
OGXV01012527
235171
Bacillota
CCA
Trp
>WENV181899837
OGXV01000015
238974
Bacillota
GAA
Phe
>WENV181900064
OGXV01001048
238974
Bacillota
GAA
Phe
>WENV181900200
OGXV01002560
144621
Bacillota
GTT
Asn
>WENV181900305
OGXV01004446
277200
Bacillota
GGC
Ala
>WENV181899959
OGXV01000402
243098
Bacillota
GGT
Thr
>WENV181899975
OGXV01000504
58712
Bacillota
CAG
Leu
>WENV181900683
OGXV01031827
245296
Bacillota
CCC
Gly
>WENV181900372
OGXV01006170
272992
Bacillota
CTT
Lys
>WENV181899963
OGXV01000403
344240
Bacillota
GCC
Gly
>WENV181900114
OGXV01001410
344240
Bacillota
GCC
Gly
>WENV181899961
OGXV01000403
196632
Bacillota
GTC
Asp
>WENV181900426
OGXV01008816
144594
Bacillota
CAC
Val
>WENV181900140
OGXV01001676
414486
Bacillota
CCC
Gly
>WENV181899843
OGXV01000022
272488
Bacillota
GAA
Phe
>WENV181900324
OGXV01005056
114075
Bacillota
TAG
Leu
>WENV181900453
OGXV01009742
273862
Bacillota
TGC
Ala
>WENV181899842
OGXV01000021
338131
Bacillota
GCC
Gly
>WENV181900449
OGXV01009694
338128
Bacillota
TTC
Glu
>WENV181899962
OGXV01000403
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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