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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181908609
OGYB01000173
119661
Verrucomicrobiota
CAA
Leu
>WENV181908799
OGYB01000827
155256
Verrucomicrobiota
TCT
Arg
>WENV181908578
OGYB01000120
246701
Verrucomicrobiota
TTT
Lys
>WENV181908719
OGYB01000396
345141
Verrucomicrobiota
TTG
Gln
>WENV181908849
OGYB01001245
345133
Verrucomicrobiota
GAC
Val
>WENV181908510
OGYB01000063
82054
Verrucomicrobiota
GTA
Tyr
>WENV181908830
OGYB01001048
246677
Verrucomicrobiota
CTT
Lys
>WENV181908831
OGYB01001048
246677
Verrucomicrobiota
CTT
Lys
>WENV181908636
OGYB01000223
344844
Verrucomicrobiota
GCA
Cys
>WENV181909022
OGYB01005282
155264
Verrucomicrobiota
GGG
Pro
>WENV181908625
OGYB01000200
344845
Verrucomicrobiota
CTG
Gln
>WENV181908626
OGYB01000200
128202
Verrucomicrobiota
GTC
Asp
>WENV181908572
OGYB01000116
414625
Verrucomicrobiota
CCC
Gly
>WENV181908683
OGYB01000290
46246
Verrucomicrobiota
TGA
Ser
>WENV181908879
OGYB01001533
97755
Verrucomicrobiota
TAG
Leu
>WENV181908512
OGYB01000064
246700
Verrucomicrobiota
TTC
Glu
>WENV181908637
OGYB01000223
246700
Verrucomicrobiota
TTC
Glu
>WENV181908511
OGYB01000064
347038
Verrucomicrobiota
GCC
Gly
>WENV181908734
OGYB01000462
347038
Verrucomicrobiota
GCC
Gly
>WENV181908908
OGYB01002002
246687
Verrucomicrobiota
CGC
Ala
>WENV181908573
OGYB01000116
419909
Verrucomicrobiota
TCC
Gly
>WENV181908467
OGYB01000045
344841
Verrucomicrobiota
CAC
Val
>WENV181908707
OGYB01000342
60880
Verrucomicrobiota
CAG
Leu
>WENV181908610
OGYB01000173
82056
Verrucomicrobiota
TAA
Leu
>WENV181908829
OGYB01001048
344842
Verrucomicrobiota
CGT
Thr
>WENV181908914
OGYB01002139
170105
Verrucomicrobiota
CAT
Met
>WENV181908974
OGYB01003154
345123
Verrucomicrobiota
TGT
Thr
>WENV181908808
OGYB01000889
345110
Verrucomicrobiota
CCT
Arg
>WENV181908513
OGYB01000064
344839
Verrucomicrobiota
GTG
His
>WENV181908716
OGYB01000384
7274
Verrucomicrobiota
CGA
Ser
>WENV181908611
OGYB01000173
246260
Verrucomicrobiota
>WENV181908745
OGYB01000501
155268
Verrucomicrobiota
CGG
Pro
>WENV181908515
OGYB01000064
82181
Verrucomicrobiota
AAG
Leu
>WENV181908574
OGYB01000116
246728
Verrucomicrobiota
GAA
Phe
>WENV181908937
OGYB01002565
7256
Verrucomicrobiota
GCT
Ser
>WENV181908684
OGYB01000290
345115
Verrucomicrobiota
CAT
Met
>WENV181908815
OGYB01000945
345119
Verrucomicrobiota
TAC
Val
>WENV181908509
OGYB01000063
345124
Verrucomicrobiota
GTT
Asn
>WENV181908630
OGYB01000211
17023
Verrucomicrobiota
GGA
Ser
>WENV181908659
OGYB01000255
345142
Verrucomicrobiota
CCG
Arg
>WENV181908514
OGYB01000064
246709
Verrucomicrobiota
CAT
Met
>WENV181908575
OGYB01000116
154693
Verrucomicrobiota
TGG
Pro
>WENV181908606
OGYB01000170
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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