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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181914954
OGYF01002017
141635
Bacteroidota
TAC
Val
>WENV181915938
OGYF01027702
235102
Bacteroidota
CGT
Thr
>WENV181914214
OGYF01000052
144657
Bacteroidota
CGG
Pro
>WENV181914735
OGYF01000922
144657
Bacteroidota
CGG
Pro
>WENV181914267
OGYF01000088
243025
Bacteroidota
CAT
Met
>WENV181914154
OGYF01000027
338155
Bacteroidota
CTC
Glu
>WENV181916223
OGYF01067595
153993
Bacteroidota
GAT
Ile
>WENV181914220
OGYF01000055
343138
Bacteroidota
CCT
Arg
>WENV181915736
OGYF01015592
343138
Bacteroidota
CCT
Arg
>WENV181914694
OGYF01000800
58715
Bacteroidota
GAG
Leu
>WENV181914591
OGYF01000505
17323
Bacteroidota
GGA
Ser
>WENV181914158
OGYF01000031
95618
Bacteroidota
TAG
Leu
>WENV181914286
OGYF01000101
338486
Bacteroidota
CAT
Met
>WENV181915436
OGYF01006947
338486
Bacteroidota
CAT
Met
>WENV181915700
OGYF01014115
338486
Bacteroidota
CAT
Met
>WENV181914199
OGYF01000044
411543
Bacteroidota
CTG
Gln
>WENV181914693
OGYF01000800
59689
Bacteroidota
CAG
Leu
>WENV181915285
OGYF01004721
59689
Bacteroidota
CAG
Leu
>WENV181915076
OGYF01002745
436206
Bacteroidota
TTG
Gln
>WENV181914439
OGYF01000243
20893
Bacteroidota
GGA
Ser
>WENV181914339
OGYF01000137
344692
Bacteroidota
GGT
Thr
>WENV181915463
OGYF01007357
344692
Bacteroidota
GGT
Thr
>WENV181914323
OGYF01000124
235182
Bacteroidota
>WENV181914535
OGYF01000395
272983
Bacteroidota
CGT
Thr
>WENV181914744
OGYF01000962
338124
Bacteroidota
CCG
Arg
>WENV181916000
OGYF01034439
338124
Bacteroidota
CCG
Arg
>WENV181915400
OGYF01006156
238121
Bacteroidota
CTT
Lys
>WENV181915401
OGYF01006156
238121
Bacteroidota
CTT
Lys
>WENV181914235
OGYF01000067
338132
Bacteroidota
GCA
Cys
>WENV181914779
OGYF01001155
338132
Bacteroidota
GCA
Cys
>WENV181914780
OGYF01001155
338132
Bacteroidota
GCA
Cys
>WENV181915084
OGYF01002799
338132
Bacteroidota
GCA
Cys
>WENV181915237
OGYF01004216
338132
Bacteroidota
GCA
Cys
>WENV181915457
OGYF01007269
338132
Bacteroidota
GCA
Cys
>WENV181915796
OGYF01017953
338132
Bacteroidota
GCA
Cys
>WENV181914750
OGYF01000981
144688
Bacteroidota
CAT
Met
>WENV181916049
OGYF01039603
45423
Bacteroidota
TGA
Ser
>WENV181914460
OGYF01000274
181746
Bacteroidota
GGC
Ala
>WENV181914147
OGYF01000021
58714
Bacteroidota
CAA
Leu
>WENV181914230
OGYF01000065
58714
Bacteroidota
CAA
Leu
>WENV181915769
OGYF01016641
235165
Bacteroidota
CCA
Trp
>WENV181914883
OGYF01001645
301449
Bacteroidota
CGG
Pro
>WENV181915361
OGYF01005407
301449
Bacteroidota
CGG
Pro
>WENV181914095
OGYF01000003
144933
Bacteroidota
TCT
Arg
>WENV181914198
OGYF01000044
141414
Bacteroidota
GGG
Pro
>WENV181915629
OGYF01011720
141414
Bacteroidota
GGG
Pro
>WENV181915605
OGYF01010922
303954
Bacteroidota
GCC
Gly
>WENV181915483
OGYF01007797
144656
Bacteroidota
GTG
His
>WENV181914506
OGYF01000328
235207
Bacteroidota
CAT
Met
>WENV181914206
OGYF01000048
144659
Bacteroidota
GTG
His
>WENV181914207
OGYF01000048
144659
Bacteroidota
GTG
His
>WENV181914215
OGYF01000052
235180
Bacteroidota
CCA
Trp
>WENV181914238
OGYF01000070
80607
Bacteroidota
GTA
Tyr
>WENV181916307
OGYF01090603
238553
Bacteroidota
GAA
Phe
>WENV181914659
OGYF01000686
154643
Bacteroidota
CAT
Met
>WENV181915388
OGYF01005805
154643
Bacteroidota
CAT
Met
>WENV181915269
OGYF01004503
144590
Bacteroidota
GTT
Asn
>WENV181915270
OGYF01004503
144590
Bacteroidota
GTT
Asn
>WENV181914942
OGYF01001950
95559
Bacteroidota
TAG
Leu
>WENV181914835
OGYF01001361
144655
Bacteroidota
GGC
Ala
>WENV181915582
OGYF01010211
144639
Bacteroidota
GGC
Ala
>WENV181914218
OGYF01000055
338164
Bacteroidota
TTC
Glu
>WENV181914219
OGYF01000055
338164
Bacteroidota
TTC
Glu
>WENV181914205
OGYF01000047
95875
Bacteroidota
TAG
Leu
>WENV181914229
OGYF01000065
95875
Bacteroidota
TAG
Leu
>WENV181914248
OGYF01000078
338314
Bacteroidota
CCT
Arg
>WENV181914524
OGYF01000367
139743
Bacteroidota
GGG
Pro
>WENV181914200
OGYF01000045
240012
Bacteroidota
CCC
Gly
>WENV181915213
OGYF01003965
44852
Bacteroidota
TAA
Leu
>WENV181915077
OGYF01002751
147439
Bacteroidota
TCT
Arg
>WENV181915476
OGYF01007615
147439
Bacteroidota
TCT
Arg
>WENV181915038
OGYF01002511
354570
Bacteroidota
TTC
Glu
>WENV181915039
OGYF01002511
354570
Bacteroidota
TTC
Glu
>WENV181914602
OGYF01000521
150485
Bacteroidota
GTT
Asn
>WENV181914603
OGYF01000521
150485
Bacteroidota
GTT
Asn
>WENV181914534
OGYF01000390
425638
Bacteroidota
CTG
Gln
>WENV181914100
OGYF01000004
19317
Bacteroidota
GGA
Ser
>WENV181915342
OGYF01005280
353927
Bacteroidota
TTC
Glu
>WENV181916053
OGYF01040644
353927
Bacteroidota
TTC
Glu
>WENV181914490
OGYF01000318
185921
Bacteroidota
GTC
Asp
>WENV181914491
OGYF01000318
185921
Bacteroidota
GTC
Asp
>WENV181914097
OGYF01000003
139062
Bacteroidota
TGG
Pro
>WENV181914586
OGYF01000491
23696
Bacteroidota
GCT
Ser
>WENV181915063
OGYF01002635
23696
Bacteroidota
GCT
Ser
>WENV181915968
OGYF01030502
414426
Bacteroidota
CTG
Gln
>WENV181914360
OGYF01000155
56823
Bacteroidota
TGA
Ser
>WENV181914361
OGYF01000155
56823
Bacteroidota
TGA
Ser
>WENV181914752
OGYF01000994
56823
Bacteroidota
TGA
Ser
>WENV181915739
OGYF01015727
56823
Bacteroidota
TGA
Ser
>WENV181915720
OGYF01014930
16220
Bacteroidota
GGA
Ser
>WENV181914486
OGYF01000312
338125
Bacteroidota
CCT
Arg
>WENV181915336
OGYF01005259
235129
Bacteroidota
GCC
Gly
>WENV181914911
OGYF01001743
313363
Bacteroidota
GAA
Phe
>WENV181915233
OGYF01004131
313363
Bacteroidota
GAA
Phe
>WENV181914291
OGYF01000105
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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