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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181917075
OGYG01002076
235146
Actinomycetota
CGT
Thr
>WENV181916444
OGYG01000036
235153
Actinomycetota
CCT
Arg
>WENV181916532
OGYG01000101
144589
Actinomycetota
ACG
Arg
>WENV181916489
OGYG01000062
37070
Actinomycetota
CGA
Ser
>WENV181917025
OGYG01001604
261773
Actinomycetota
CCT
Arg
>WENV181917479
OGYG01025574
273786
Actinomycetota
CGT
Thr
>WENV181916381
OGYG01000007
245301
Actinomycetota
GCC
Gly
>WENV181916383
OGYG01000007
245301
Actinomycetota
GCC
Gly
>WENV181916384
OGYG01000007
245301
Actinomycetota
GCC
Gly
>WENV181917321
OGYG01007931
411601
Actinomycetota
CCC
Gly
>WENV181916926
OGYG01000916
241401
Actinomycetota
CCA
Trp
>WENV181917077
OGYG01002136
23370
Actinomycetota
GCT
Ser
>WENV181916448
OGYG01000037
235174
Actinomycetota
TGC
Ala
>WENV181916445
OGYG01000037
235101
Actinomycetota
TTT
Lys
>WENV181916809
OGYG01000536
153948
Actinomycetota
GGG
Pro
>WENV181916566
OGYG01000150
150473
Actinomycetota
CTC
Glu
>WENV181917126
OGYG01002713
150473
Actinomycetota
CTC
Glu
>WENV181917272
OGYG01006353
235199
Actinomycetota
CAC
Val
>WENV181916547
OGYG01000125
198659
Actinomycetota
TAC
Val
>WENV181916608
OGYG01000199
254857
Actinomycetota
CCG
Arg
>WENV181917386
OGYG01011838
254857
Actinomycetota
CCG
Arg
>WENV181916921
OGYG01000914
144700
Actinomycetota
CAT
Met
>WENV181916490
OGYG01000062
44942
Actinomycetota
TGA
Ser
>WENV181916887
OGYG01000762
144636
Actinomycetota
GAT
Ile
>WENV181916612
OGYG01000204
98279
Actinomycetota
GTA
Tyr
>WENV181916590
OGYG01000175
338148
Actinomycetota
CTG
Gln
>WENV181916550
OGYG01000137
235148
Actinomycetota
GTT
Asn
>WENV181917540
OGYG01038107
338238
Actinomycetota
CCA
Trp
>WENV181916857
OGYG01000664
176456
Actinomycetota
TCT
Arg
>WENV181917221
OGYG01004749
144825
Actinomycetota
CAT
Met
>WENV181916865
OGYG01000701
145347
Actinomycetota
CAA
Leu
>WENV181917447
OGYG01019703
162402
Actinomycetota
GGG
Pro
>WENV181916738
OGYG01000391
338139
Actinomycetota
GTT
Asn
>WENV181916737
OGYG01000391
338139
Actinomycetota
GTT
Asn
>WENV181917074
OGYG01002068
235348
Actinomycetota
CCT
Arg
>WENV181916614
OGYG01000204
16467
Actinomycetota
GCT
Ser
>WENV181916449
OGYG01000037
411554
Actinomycetota
CCC
Gly
>WENV181917100
OGYG01002381
144595
Actinomycetota
CAA
Leu
>WENV181916412
OGYG01000013
145343
Actinomycetota
GGG
Pro
>WENV181916623
OGYG01000215
235149
Actinomycetota
CCT
Arg
>WENV181916565
OGYG01000150
414234
Actinomycetota
CTG
Gln
>WENV181917099
OGYG01002381
163764
Actinomycetota
TGG
Pro
>WENV181917238
OGYG01005026
246365
Actinomycetota
ACG
Arg
>WENV181916620
OGYG01000209
145269
Actinomycetota
CAT
Met
>WENV181916591
OGYG01000175
235121
Actinomycetota
CGT
Thr
>WENV181916866
OGYG01000701
144635
Actinomycetota
TGG
Pro
>WENV181917081
OGYG01002183
119485
Actinomycetota
TAA
Leu
>WENV181917370
OGYG01010560
240124
Actinomycetota
CGT
Thr
>WENV181916446
OGYG01000037
80622
Actinomycetota
CAG
Leu
>WENV181917314
OGYG01007508
377770
Actinomycetota
CTG
Gln
>WENV181917258
OGYG01005701
16222
Actinomycetota
GAG
Leu
>WENV181916386
OGYG01000007
158513
Actinomycetota
TGG
Pro
>WENV181916382
OGYG01000007
412834
Actinomycetota
GCA
Cys
>WENV181916549
OGYG01000137
235173
Actinomycetota
GGC
Ala
>WENV181916714
OGYG01000332
278447
Actinomycetota
GTG
His
>WENV181917051
OGYG01001948
241408
Actinomycetota
CTT
Lys
>WENV181916920
OGYG01000914
95593
Actinomycetota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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