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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
107 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181919762
OGYI01002663
196621
Bacillota
GTC
Asp
>WENV181920103
OGYI01016424
202812
Bacillota
CAT
Met
>WENV181919130
OGYI01000187
37213
Bacillota
TGA
Ser
>WENV181919367
OGYI01000680
37213
Bacillota
TGA
Ser
>WENV181919685
OGYI01002001
144612
Bacillota
TCT
Arg
>WENV181920002
OGYI01008597
144612
Bacillota
TCT
Arg
>WENV181919121
OGYI01000184
154063
Bacillota
CGG
Pro
>WENV181919856
OGYI01004148
154063
Bacillota
CGG
Pro
>WENV181919369
OGYI01000684
267649
Bacillota
TAC
Val
>WENV181919850
OGYI01004093
267649
Bacillota
TAC
Val
>WENV181920056
OGYI01011944
267649
Bacillota
TAC
Val
>WENV181919768
OGYI01002711
235098
Bacillota
GAC
Val
>WENV181919888
OGYI01004657
338152
Bacillota
TTC
Glu
>WENV181919940
OGYI01005826
23769
Bacillota
TAA
Leu
>WENV181919735
OGYI01002410
44854
Bacillota
TGA
Ser
>WENV181919354
OGYI01000650
235154
Bacillota
GTT
Asn
>WENV181919519
OGYI01001089
302150
Bacillota
TAC
Val
>WENV181919666
OGYI01001916
302150
Bacillota
TAC
Val
>WENV181919969
OGYI01006829
97943
Bacillota
GTA
Tyr
>WENV181919592
OGYI01001472
338147
Bacillota
CTC
Glu
>WENV181920150
OGYI01026750
338208
Bacillota
>WENV181919755
OGYI01002598
340802
Bacillota
TTG
Gln
>WENV181919971
OGYI01006951
293599
Bacillota
CTT
Lys
>WENV181919122
OGYI01000184
338143
Bacillota
CTC
Glu
>WENV181919857
OGYI01004148
338143
Bacillota
CTC
Glu
>WENV181920085
OGYI01014418
338143
Bacillota
CTC
Glu
>WENV181920062
OGYI01012450
37083
Bacillota
TGA
Ser
>WENV181920149
OGYI01026750
116350
Bacillota
TAG
Leu
>WENV181919285
OGYI01000416
429429
Bacillota
CCA
Trp
>WENV181919424
OGYI01000780
429429
Bacillota
CCA
Trp
>WENV181919582
OGYI01001397
429429
Bacillota
CCA
Trp
>WENV181919976
OGYI01006984
429429
Bacillota
CCA
Trp
>WENV181919428
OGYI01000802
41154
Bacillota
TAA
Leu
>WENV181919900
OGYI01005003
11034
Bacillota
GGA
Ser
>WENV181920205
OGYI01041055
247057
Bacillota
TGC
Ala
>WENV181919123
OGYI01000184
156937
Bacillota
GTG
His
>WENV181919981
OGYI01007190
338550
Bacillota
>WENV181919458
OGYI01000883
274189
Bacillota
TGT
Thr
>WENV181919720
OGYI01002262
235079
Bacillota
GAA
Phe
>WENV181919847
OGYI01004003
338149
Bacillota
CTC
Glu
>WENV181919986
OGYI01007533
245298
Bacillota
CGG
Pro
>WENV181920134
OGYI01022722
380750
Bacillota
TGT
Thr
>WENV181920028
OGYI01009732
155089
Bacillota
CAT
Met
>WENV181920030
OGYI01009732
155089
Bacillota
CAT
Met
>WENV181920057
OGYI01011944
155089
Bacillota
CAT
Met
>WENV181920068
OGYI01012866
287000
Bacillota
GTT
Asn
>WENV181919745
OGYI01002517
413152
Bacillota
TCC
Gly
>WENV181919526
OGYI01001139
162445
Bacillota
CAT
Met
>WENV181919560
OGYI01001289
162445
Bacillota
CAT
Met
>WENV181919867
OGYI01004401
162445
Bacillota
CAT
Met
>WENV181920178
OGYI01032279
201704
Bacillota
GAT
Ile
>WENV181919397
OGYI01000745
152492
Bacillota
GGG
Pro
>WENV181919401
OGYI01000761
152492
Bacillota
GGG
Pro
>WENV181919434
OGYI01000825
152492
Bacillota
GGG
Pro
>WENV181919611
OGYI01001576
152492
Bacillota
GGG
Pro
>WENV181919818
OGYI01003496
152492
Bacillota
GGG
Pro
>WENV181920007
OGYI01008772
100326
Bacillota
GTA
Tyr
>WENV181919754
OGYI01002598
144610
Bacillota
GTG
His
>WENV181919533
OGYI01001167
353537
Bacillota
GTT
Asn
>WENV181919388
OGYI01000707
240017
Bacillota
GCC
Gly
>WENV181919647
OGYI01001759
411547
Bacillota
CTG
Gln
>WENV181919985
OGYI01007533
411547
Bacillota
CTG
Gln
>WENV181919429
OGYI01000802
147684
Bacillota
ACG
Arg
>WENV181919698
OGYI01002109
147684
Bacillota
ACG
Arg
>WENV181919811
OGYI01003385
147684
Bacillota
ACG
Arg
>WENV181919736
OGYI01002410
4624
Bacillota
GCT
Ser
>WENV181919387
OGYI01000707
263765
Bacillota
TAC
Val
>WENV181919695
OGYI01002069
412387
Bacillota
GCA
Cys
>WENV181919609
OGYI01001567
18852
Bacillota
GCT
Ser
>WENV181919813
OGYI01003392
18852
Bacillota
GCT
Ser
>WENV181920010
OGYI01008865
235095
Bacillota
GGT
Thr
>WENV181919836
OGYI01003831
198159
Bacillota
CAT
Met
>WENV181920133
OGYI01022722
235289
Bacillota
GTT
Asn
>WENV181919766
OGYI01002704
411549
Bacillota
TTG
Gln
>WENV181919723
OGYI01002269
59296
Bacillota
AAG
Leu
>WENV181919602
OGYI01001519
148188
Bacillota
CCG
Arg
>WENV181919587
OGYI01001441
237846
Bacillota
GCC
Gly
>WENV181919083
OGYI01000136
298639
Bacillota
GTT
Asn
>WENV181919744
OGYI01002497
80612
Bacillota
GTA
Tyr
>WENV181919243
OGYI01000360
235127
Bacillota
TTT
Lys
>WENV181920214
OGYI01044306
147674
Bacillota
TCT
Arg
>WENV181920132
OGYI01022722
163943
Bacillota
GTC
Asp
>WENV181919861
OGYI01004260
298620
Bacillota
CAT
Met
>WENV181919891
OGYI01004762
411739
Bacillota
TCC
Gly
>WENV181919714
OGYI01002234
235638
Bacillota
GAA
Phe
>WENV181920088
OGYI01014619
235124
Bacillota
TGG
Pro
>WENV181920005
OGYI01008659
237963
Bacillota
TTT
Lys
>WENV181919849
OGYI01004067
338129
Bacillota
TGT
Thr
>WENV181920003
OGYI01008659
279635
Bacillota
GTG
His
>WENV181919430
OGYI01000804
144583
Bacillota
ACG
Arg
>WENV181920074
OGYI01013541
144672
Bacillota
TCT
Arg
>WENV181918976
OGYI01000048
419877
Bacillota
TCC
Gly
>WENV181919761
OGYI01002663
235171
Bacillota
CCA
Trp
>WENV181919909
OGYI01005118
144621
Bacillota
GTT
Asn
>WENV181920120
OGYI01018861
353527
Bacillota
TTC
Glu
>WENV181919450
OGYI01000871
58712
Bacillota
CAG
Leu
>WENV181920151
OGYI01026750
144762
Bacillota
TCT
Arg
>WENV181919737
OGYI01002425
245296
Bacillota
CCC
Gly
>WENV181919848
OGYI01004003
272992
Bacillota
CTT
Lys
>WENV181920041
OGYI01010656
299139
Bacillota
TGC
Ala
>WENV181919649
OGYI01001774
144594
Bacillota
CAC
Val
>WENV181919678
OGYI01001975
272488
Bacillota
GAA
Phe
>WENV181919895
OGYI01004842
272488
Bacillota
GAA
Phe
>WENV181920036
OGYI01010230
272488
Bacillota
GAA
Phe
>WENV181919539
OGYI01001191
119513
Bacillota
CAA
Leu
>WENV181919538
OGYI01001188
338131
Bacillota
GCC
Gly
>WENV181920116
OGYI01018657
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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