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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181923513
OGYL01000719
119661
Verrucomicrobiota
CAA
Leu
>WENV181923696
OGYL01001412
155256
Verrucomicrobiota
TCT
Arg
>WENV181923667
OGYL01001263
246701
Verrucomicrobiota
TTT
Lys
>WENV181923689
OGYL01001377
345141
Verrucomicrobiota
TTG
Gln
>WENV181924173
OGYL01006207
345133
Verrucomicrobiota
GAC
Val
>WENV181923213
OGYL01000022
82054
Verrucomicrobiota
GTA
Tyr
>WENV181923235
OGYL01000049
246677
Verrucomicrobiota
CTT
Lys
>WENV181923220
OGYL01000033
344844
Verrucomicrobiota
GCA
Cys
>WENV181923838
OGYL01002181
344845
Verrucomicrobiota
CTG
Gln
>WENV181923388
OGYL01000350
128202
Verrucomicrobiota
GTC
Asp
>WENV181923207
OGYL01000017
414625
Verrucomicrobiota
CCC
Gly
>WENV181923972
OGYL01003444
46246
Verrucomicrobiota
TGA
Ser
>WENV181923186
OGYL01000001
97755
Verrucomicrobiota
TAG
Leu
>WENV181923221
OGYL01000033
246700
Verrucomicrobiota
TTC
Glu
>WENV181923311
OGYL01000188
246700
Verrucomicrobiota
TTC
Glu
>WENV181923289
OGYL01000141
246687
Verrucomicrobiota
CGC
Ala
>WENV181923204
OGYL01000017
419909
Verrucomicrobiota
TCC
Gly
>WENV181923370
OGYL01000322
344841
Verrucomicrobiota
CAC
Val
>WENV181923190
OGYL01000002
60880
Verrucomicrobiota
CAG
Leu
>WENV181923595
OGYL01000987
82056
Verrucomicrobiota
TAA
Leu
>WENV181923234
OGYL01000049
344842
Verrucomicrobiota
CGT
Thr
>WENV181923824
OGYL01002077
170105
Verrucomicrobiota
CAT
Met
>WENV181923222
OGYL01000033
345123
Verrucomicrobiota
TGT
Thr
>WENV181923187
OGYL01000001
345110
Verrucomicrobiota
CCT
Arg
>WENV181923312
OGYL01000188
344839
Verrucomicrobiota
GTG
His
>WENV181923524
OGYL01000752
7274
Verrucomicrobiota
CGA
Ser
>WENV181923596
OGYL01000987
246260
Verrucomicrobiota
>WENV181923236
OGYL01000049
155268
Verrucomicrobiota
CGG
Pro
>WENV181923219
OGYL01000033
82181
Verrucomicrobiota
AAG
Leu
>WENV181923205
OGYL01000017
246728
Verrucomicrobiota
GAA
Phe
>WENV181923597
OGYL01000987
7256
Verrucomicrobiota
GCT
Ser
>WENV181924005
OGYL01003685
345115
Verrucomicrobiota
CAT
Met
>WENV181923240
OGYL01000053
345119
Verrucomicrobiota
TAC
Val
>WENV181923212
OGYL01000022
345124
Verrucomicrobiota
GTT
Asn
>WENV181923223
OGYL01000036
17023
Verrucomicrobiota
GGA
Ser
>WENV181923305
OGYL01000175
368497
Verrucomicrobiota
GCC
Gly
>WENV181923310
OGYL01000188
368497
Verrucomicrobiota
GCC
Gly
>WENV181923362
OGYL01000308
345142
Verrucomicrobiota
CCG
Arg
>WENV181923313
OGYL01000188
246709
Verrucomicrobiota
CAT
Met
>WENV181923206
OGYL01000017
154693
Verrucomicrobiota
TGG
Pro
>WENV181923188
OGYL01000002
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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