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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181931106
OGYQ01000024
24650
Bacillota
TAA
Leu
>WENV181931471
OGYQ01000514
24650
Bacillota
TAA
Leu
>WENV181931789
OGYQ01003387
24650
Bacillota
TAA
Leu
>WENV181931705
OGYQ01001878
202812
Bacillota
CAT
Met
>WENV181931959
OGYQ01016881
390153
Bacillota
GCC
Gly
>WENV181931214
OGYQ01000096
37213
Bacillota
TGA
Ser
>WENV181931649
OGYQ01001448
144612
Bacillota
TCT
Arg
>WENV181931302
OGYQ01000188
267649
Bacillota
TAC
Val
>WENV181931886
OGYQ01006771
235098
Bacillota
GAC
Val
>WENV181931262
OGYQ01000141
338152
Bacillota
TTC
Glu
>WENV181931157
OGYQ01000059
148239
Bacillota
TCT
Arg
>WENV181931351
OGYQ01000266
425593
Bacillota
CCC
Gly
>WENV181931657
OGYQ01001525
241441
Bacillota
GCC
Gly
>WENV181931647
OGYQ01001430
37549
Bacillota
TAA
Leu
>WENV181931963
OGYQ01017464
246023
Bacillota
TGC
Ala
>WENV181931883
OGYQ01006438
307003
Bacillota
TGC
Ala
>WENV181931349
OGYQ01000260
59312
Bacillota
CAG
Leu
>WENV181931380
OGYQ01000316
193585
Bacillota
CGG
Pro
>WENV181931451
OGYQ01000484
243119
Bacillota
CTT
Lys
>WENV181931997
OGYQ01023589
235150
Bacillota
TGC
Ala
>WENV181931311
OGYQ01000198
152047
Bacillota
GGG
Pro
>WENV181931771
OGYQ01002943
16820
Bacillota
GCT
Ser
>WENV181931070
OGYQ01000010
340802
Bacillota
TTG
Gln
>WENV181931185
OGYQ01000075
293599
Bacillota
CTT
Lys
>WENV181931529
OGYQ01000658
293599
Bacillota
CTT
Lys
>WENV181931435
OGYQ01000432
152512
Bacillota
CCT
Arg
>WENV181931643
OGYQ01001430
152459
Bacillota
GTC
Asp
>WENV181931723
OGYQ01002046
152459
Bacillota
GTC
Asp
>WENV181931726
OGYQ01002046
152459
Bacillota
GTC
Asp
>WENV181931965
OGYQ01017527
341763
Bacillota
CTC
Glu
>WENV181931137
OGYQ01000048
144668
Bacillota
GTC
Asp
>WENV181931183
OGYQ01000074
429429
Bacillota
CCA
Trp
>WENV181931757
OGYQ01002636
429429
Bacillota
CCA
Trp
>WENV181931288
OGYQ01000165
313454
Bacillota
GAA
Phe
>WENV181931862
OGYQ01005532
247057
Bacillota
TGC
Ala
>WENV181931381
OGYQ01000316
10943
Bacillota
GGA
Ser
>WENV181931158
OGYQ01000059
156937
Bacillota
GTG
His
>WENV181931292
OGYQ01000172
342736
Bacillota
TTG
Gln
>WENV181931691
OGYQ01001693
296878
Bacillota
GTT
Asn
>WENV181932017
OGYQ01030112
316443
Bacillota
GTC
Asp
>WENV181931131
OGYQ01000043
152513
Bacillota
GAC
Val
>WENV181931132
OGYQ01000043
152513
Bacillota
GAC
Val
>WENV181931428
OGYQ01000406
155089
Bacillota
CAT
Met
>WENV181931541
OGYQ01000698
37551
Bacillota
CGA
Ser
>WENV181931725
OGYQ01002046
81644
Bacillota
GAG
Leu
>WENV181931727
OGYQ01002046
81644
Bacillota
GAG
Leu
>WENV181931733
OGYQ01002109
413152
Bacillota
TCC
Gly
>WENV181931962
OGYQ01017464
201704
Bacillota
GAT
Ile
>WENV181931169
OGYQ01000066
152492
Bacillota
GGG
Pro
>WENV181931731
OGYQ01002077
148268
Bacillota
CGG
Pro
>WENV181931190
OGYQ01000075
412387
Bacillota
GCA
Cys
>WENV181931646
OGYQ01001430
419945
Bacillota
GCA
Cys
>WENV181931600
OGYQ01000996
419639
Bacillota
GCA
Cys
>WENV181931440
OGYQ01000432
152045
Bacillota
CAT
Met
>WENV181931692
OGYQ01001693
243398
Bacillota
TTC
Glu
>WENV181931419
OGYQ01000389
37588
Bacillota
TGA
Ser
>WENV181931378
OGYQ01000315
152046
Bacillota
TCT
Arg
>WENV181931966
OGYQ01017527
298639
Bacillota
GTT
Asn
>WENV181931425
OGYQ01000405
256380
Bacillota
>WENV181931448
OGYQ01000484
152051
Bacillota
ACG
Arg
>WENV181931781
OGYQ01003187
243401
Bacillota
CGT
Thr
>WENV181932002
OGYQ01023993
147183
Bacillota
GTT
Asn
>WENV181931026
OGYQ01000002
238974
Bacillota
GAA
Phe
>WENV181931030
OGYQ01000002
238974
Bacillota
GAA
Phe
>WENV181931166
OGYQ01000063
277200
Bacillota
GGC
Ala
>WENV181931092
OGYQ01000018
243098
Bacillota
GGT
Thr
>WENV181931221
OGYQ01000099
344240
Bacillota
GCC
Gly
>WENV181931597
OGYQ01000996
152497
Bacillota
GTC
Asp
>WENV181931439
OGYQ01000432
281472
Bacillota
GGT
Thr
>WENV181931861
OGYQ01005532
198135
Bacillota
GAT
Ile
>WENV181931512
OGYQ01000602
196632
Bacillota
GTC
Asp
>WENV181931826
OGYQ01004273
343021
Bacillota
CAT
Met
>WENV181931310
OGYQ01000197
414486
Bacillota
CCC
Gly
>WENV181931422
OGYQ01000394
114075
Bacillota
TAG
Leu
>WENV181931732
OGYQ01002104
119513
Bacillota
CAA
Leu
>WENV181931549
OGYQ01000709
413179
Bacillota
CCC
Gly
>WENV181931969
OGYQ01017646
338128
Bacillota
TTC
Glu
>WENV181931513
OGYQ01000602
245344
Bacillota
GAA
Phe
>WENV181931598
OGYQ01000996
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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