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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
118 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181932313
OGYR01000256
196621
Bacillota
GTC
Asp
>WENV181932616
OGYR01001880
196621
Bacillota
GTC
Asp
>WENV181932622
OGYR01001945
196621
Bacillota
GTC
Asp
>WENV181932625
OGYR01001982
196621
Bacillota
GTC
Asp
>WENV181932635
OGYR01002211
196621
Bacillota
GTC
Asp
>WENV181932368
OGYR01000362
309417
Bacillota
GGC
Ala
>WENV181932450
OGYR01000574
37213
Bacillota
TGA
Ser
>WENV181932369
OGYR01000364
144612
Bacillota
TCT
Arg
>WENV181932659
OGYR01003636
154063
Bacillota
CGG
Pro
>WENV181932122
OGYR01000035
267649
Bacillota
TAC
Val
>WENV181932124
OGYR01000035
267649
Bacillota
TAC
Val
>WENV181932402
OGYR01000391
267649
Bacillota
TAC
Val
>WENV181932406
OGYR01000396
235098
Bacillota
GAC
Val
>WENV181932465
OGYR01000620
235098
Bacillota
GAC
Val
>WENV181932734
OGYR01008916
235098
Bacillota
GAC
Val
>WENV181932137
OGYR01000040
338152
Bacillota
TTC
Glu
>WENV181932672
OGYR01004328
250201
Bacillota
TGC
Ala
>WENV181932392
OGYR01000382
148239
Bacillota
TCT
Arg
>WENV181932425
OGYR01000482
44854
Bacillota
TGA
Ser
>WENV181932466
OGYR01000620
44854
Bacillota
TGA
Ser
>WENV181932596
OGYR01001585
44854
Bacillota
TGA
Ser
>WENV181932136
OGYR01000040
235154
Bacillota
GTT
Asn
>WENV181932832
OGYR01020989
144577
Bacillota
GAT
Ile
>WENV181932292
OGYR01000200
304022
Bacillota
GCC
Gly
>WENV181932311
OGYR01000256
304022
Bacillota
GCC
Gly
>WENV181932315
OGYR01000256
304022
Bacillota
GCC
Gly
>WENV181932634
OGYR01002211
304022
Bacillota
GCC
Gly
>WENV181932636
OGYR01002211
304022
Bacillota
GCC
Gly
>WENV181932241
OGYR01000141
59312
Bacillota
CAG
Leu
>WENV181932761
OGYR01010442
391536
Bacillota
TTC
Glu
>WENV181932186
OGYR01000081
338143
Bacillota
CTC
Glu
>WENV181932447
OGYR01000562
338143
Bacillota
CTC
Glu
>WENV181932347
OGYR01000321
429429
Bacillota
CCA
Trp
>WENV181932733
OGYR01008824
16834
Bacillota
GCT
Ser
>WENV181932503
OGYR01000726
11034
Bacillota
GGA
Ser
>WENV181932656
OGYR01003450
11034
Bacillota
GGA
Ser
>WENV181932312
OGYR01000256
235117
Bacillota
TAC
Val
>WENV181932291
OGYR01000200
235079
Bacillota
GAA
Phe
>WENV181932314
OGYR01000256
235079
Bacillota
GAA
Phe
>WENV181932633
OGYR01002211
235079
Bacillota
GAA
Phe
>WENV181932831
OGYR01020989
235087
Bacillota
TGC
Ala
>WENV181932762
OGYR01010442
243612
Bacillota
TAC
Val
>WENV181932380
OGYR01000376
149041
Bacillota
GTC
Asp
>WENV181932468
OGYR01000626
338149
Bacillota
CTC
Glu
>WENV181932214
OGYR01000107
37269
Bacillota
TGA
Ser
>WENV181932816
OGYR01016709
162445
Bacillota
CAT
Met
>WENV181932386
OGYR01000382
144599
Bacillota
GTC
Asp
>WENV181932085
OGYR01000012
100326
Bacillota
GTA
Tyr
>WENV181932166
OGYR01000063
100326
Bacillota
GTA
Tyr
>WENV181932393
OGYR01000382
144610
Bacillota
GTG
His
>WENV181932337
OGYR01000284
411547
Bacillota
CTG
Gln
>WENV181932457
OGYR01000593
411547
Bacillota
CTG
Gln
>WENV181932426
OGYR01000482
4624
Bacillota
GCT
Ser
>WENV181932467
OGYR01000620
4624
Bacillota
GCT
Ser
>WENV181932597
OGYR01001585
4624
Bacillota
GCT
Ser
>WENV181932677
OGYR01005214
412387
Bacillota
GCA
Cys
>WENV181932181
OGYR01000069
313164
Bacillota
TTT
Lys
>WENV181932260
OGYR01000161
313164
Bacillota
TTT
Lys
>WENV181932565
OGYR01001192
235095
Bacillota
GGT
Thr
>WENV181932617
OGYR01001880
235095
Bacillota
GGT
Thr
>WENV181932621
OGYR01001945
235095
Bacillota
GGT
Thr
>WENV181932623
OGYR01001945
235095
Bacillota
GGT
Thr
>WENV181932626
OGYR01001982
235095
Bacillota
GGT
Thr
>WENV181932627
OGYR01001982
235095
Bacillota
GGT
Thr
>WENV181932378
OGYR01000376
239832
Bacillota
TGT
Thr
>WENV181932232
OGYR01000127
419639
Bacillota
GCA
Cys
>WENV181932296
OGYR01000217
411549
Bacillota
TTG
Gln
>WENV181932473
OGYR01000632
411549
Bacillota
TTG
Gln
>WENV181932603
OGYR01001714
411549
Bacillota
TTG
Gln
>WENV181932756
OGYR01010319
59296
Bacillota
AAG
Leu
>WENV181932410
OGYR01000429
148188
Bacillota
CCG
Arg
>WENV181932479
OGYR01000645
148188
Bacillota
CCG
Arg
>WENV181932570
OGYR01001256
148188
Bacillota
CCG
Arg
>WENV181932581
OGYR01001395
148188
Bacillota
CCG
Arg
>WENV181932641
OGYR01002342
148188
Bacillota
CCG
Arg
>WENV181932739
OGYR01009423
237846
Bacillota
GCC
Gly
>WENV181932538
OGYR01000934
256380
Bacillota
>WENV181932416
OGYR01000433
235127
Bacillota
TTT
Lys
>WENV181932757
OGYR01010442
235197
Bacillota
GTC
Asp
>WENV181932759
OGYR01010442
368876
Bacillota
GCC
Gly
>WENV181932703
OGYR01006468
298620
Bacillota
CAT
Met
>WENV181932517
OGYR01000800
235124
Bacillota
TGG
Pro
>WENV181932588
OGYR01001516
235124
Bacillota
TGG
Pro
>WENV181932640
OGYR01002327
338129
Bacillota
TGT
Thr
>WENV181932439
OGYR01000542
144583
Bacillota
ACG
Arg
>WENV181932632
OGYR01002209
144583
Bacillota
ACG
Arg
>WENV181932109
OGYR01000024
144672
Bacillota
TCT
Arg
>WENV181932624
OGYR01001982
235171
Bacillota
CCA
Trp
>WENV181932168
OGYR01000063
238974
Bacillota
GAA
Phe
>WENV181932309
OGYR01000253
238974
Bacillota
GAA
Phe
>WENV181932469
OGYR01000626
144621
Bacillota
GTT
Asn
>WENV181932519
OGYR01000809
144621
Bacillota
GTT
Asn
>WENV181932602
OGYR01001684
144621
Bacillota
GTT
Asn
>WENV181932638
OGYR01002246
144621
Bacillota
GTT
Asn
>WENV181932094
OGYR01000016
277200
Bacillota
GGC
Ala
>WENV181932099
OGYR01000018
243098
Bacillota
GGT
Thr
>WENV181932363
OGYR01000360
58712
Bacillota
CAG
Leu
>WENV181932488
OGYR01000678
58712
Bacillota
CAG
Leu
>WENV181932646
OGYR01002587
58712
Bacillota
CAG
Leu
>WENV181932375
OGYR01000375
245296
Bacillota
CCC
Gly
>WENV181932853
OGYR01027630
273029
Bacillota
TGT
Thr
>WENV181932151
OGYR01000049
344240
Bacillota
GCC
Gly
>WENV181932231
OGYR01000127
344240
Bacillota
GCC
Gly
>WENV181932354
OGYR01000336
344240
Bacillota
GCC
Gly
>WENV181932150
OGYR01000049
196632
Bacillota
GTC
Asp
>WENV181932229
OGYR01000127
196632
Bacillota
GTC
Asp
>WENV181932265
OGYR01000168
196632
Bacillota
GTC
Asp
>WENV181932828
OGYR01019720
299139
Bacillota
TGC
Ala
>WENV181932511
OGYR01000773
144594
Bacillota
CAC
Val
>WENV181932609
OGYR01001822
144594
Bacillota
CAC
Val
>WENV181932652
OGYR01003132
144594
Bacillota
CAC
Val
>WENV181932170
OGYR01000063
414486
Bacillota
CCC
Gly
>WENV181932760
OGYR01010442
287034
Bacillota
GTT
Asn
>WENV181932270
OGYR01000170
338131
Bacillota
GCC
Gly
>WENV181932443
OGYR01000557
338128
Bacillota
TTC
Glu
>WENV181932445
OGYR01000561
338128
Bacillota
TTC
Glu
>WENV181932230
OGYR01000127
245344
Bacillota
GAA
Phe
>WENV181932266
OGYR01000168
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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