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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181935207
OGYU01001685
235097
Bacteroidota
TTT
Lys
>WENV181935311
OGYU01002824
235097
Bacteroidota
TTT
Lys
>WENV181935463
OGYU01004636
235102
Bacteroidota
CGT
Thr
>WENV181935945
OGYU01057035
338155
Bacteroidota
CTC
Glu
>WENV181935789
OGYU01019880
411543
Bacteroidota
CTG
Gln
>WENV181935022
OGYU01000627
338124
Bacteroidota
CCG
Arg
>WENV181935616
OGYU01009425
338124
Bacteroidota
CCG
Arg
>WENV181935124
OGYU01001120
235203
Bacteroidota
TTT
Lys
>WENV181935328
OGYU01002948
338132
Bacteroidota
GCA
Cys
>WENV181935692
OGYU01013335
338132
Bacteroidota
GCA
Cys
>WENV181934937
OGYU01000353
144656
Bacteroidota
GTG
His
>WENV181935334
OGYU01003025
144656
Bacteroidota
GTG
His
>WENV181935335
OGYU01003025
144656
Bacteroidota
GTG
His
>WENV181935658
OGYU01011180
235207
Bacteroidota
CAT
Met
>WENV181935250
OGYU01002088
80607
Bacteroidota
GTA
Tyr
>WENV181935412
OGYU01003921
80607
Bacteroidota
GTA
Tyr
>WENV181935861
OGYU01034333
16999
Bacteroidota
GGA
Ser
>WENV181935337
OGYU01003066
144590
Bacteroidota
GTT
Asn
>WENV181935568
OGYU01007541
95559
Bacteroidota
TAG
Leu
>WENV181935887
OGYU01040037
95875
Bacteroidota
TAG
Leu
>WENV181935437
OGYU01004149
44852
Bacteroidota
TAA
Leu
>WENV181935378
OGYU01003588
150485
Bacteroidota
GTT
Asn
>WENV181935379
OGYU01003588
150485
Bacteroidota
GTT
Asn
>WENV181935380
OGYU01003588
150485
Bacteroidota
GTT
Asn
>WENV181935355
OGYU01003212
16224
Bacteroidota
GGA
Ser
>WENV181935093
OGYU01000884
16220
Bacteroidota
GGA
Ser
>WENV181935358
OGYU01003303
338125
Bacteroidota
CCT
Arg
>WENV181935877
OGYU01037401
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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