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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
134 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181962135
OGZO01076178
24650
Bacillota
TAA
Leu
>WENV181961258
OGZO01005525
196621
Bacillota
GTC
Asp
>WENV181960415
OGZO01000071
155958
Bacillota
GAT
Ile
>WENV181962136
OGZO01076336
202812
Bacillota
CAT
Met
>WENV181961420
OGZO01009245
309417
Bacillota
GGC
Ala
>WENV181961613
OGZO01015567
309417
Bacillota
GGC
Ala
>WENV181961465
OGZO01009909
158247
Bacillota
>WENV181961710
OGZO01020954
158247
Bacillota
>WENV181962299
OGZO01122872
155113
Bacillota
CGG
Pro
>WENV181960554
OGZO01000299
144612
Bacillota
TCT
Arg
>WENV181960961
OGZO01002268
144612
Bacillota
TCT
Arg
>WENV181962238
OGZO01104983
144612
Bacillota
TCT
Arg
>WENV181960964
OGZO01002296
154063
Bacillota
CGG
Pro
>WENV181961338
OGZO01007037
154063
Bacillota
CGG
Pro
>WENV181961380
OGZO01008094
154063
Bacillota
CGG
Pro
>WENV181962277
OGZO01111723
235134
Bacillota
GAA
Phe
>WENV181961124
OGZO01003957
235098
Bacillota
GAC
Val
>WENV181961256
OGZO01005478
235098
Bacillota
GAC
Val
>WENV181961532
OGZO01011982
235098
Bacillota
GAC
Val
>WENV181961870
OGZO01032551
235098
Bacillota
GAC
Val
>WENV181960418
OGZO01000075
338152
Bacillota
TTC
Glu
>WENV181960835
OGZO01001426
148239
Bacillota
TCT
Arg
>WENV181961580
OGZO01014026
44854
Bacillota
TGA
Ser
>WENV181962011
OGZO01047652
44854
Bacillota
TGA
Ser
>WENV181960499
OGZO01000172
235154
Bacillota
GTT
Asn
>WENV181961992
OGZO01044795
37549
Bacillota
TAA
Leu
>WENV181961915
OGZO01037633
144577
Bacillota
GAT
Ile
>WENV181961898
OGZO01035691
37071
Bacillota
TGA
Ser
>WENV181961690
OGZO01020315
307003
Bacillota
TGC
Ala
>WENV181960958
OGZO01002254
59312
Bacillota
CAG
Leu
>WENV181961398
OGZO01008693
59312
Bacillota
CAG
Leu
>WENV181962008
OGZO01047053
193585
Bacillota
CGG
Pro
>WENV181961460
OGZO01009885
338147
Bacillota
CTC
Glu
>WENV181961614
OGZO01015580
338147
Bacillota
CTC
Glu
>WENV181962199
OGZO01095162
152047
Bacillota
GGG
Pro
>WENV181960673
OGZO01000667
155273
Bacillota
CAT
Met
>WENV181962142
OGZO01078165
235294
Bacillota
TGC
Ala
>WENV181961650
OGZO01017735
152512
Bacillota
CCT
Arg
>WENV181961737
OGZO01022575
235114
Bacillota
TTT
Lys
>WENV181961886
OGZO01034865
388249
Bacillota
GCA
Cys
>WENV181960593
OGZO01000440
429429
Bacillota
CCA
Trp
>WENV181960705
OGZO01000820
429429
Bacillota
CCA
Trp
>WENV181960950
OGZO01002189
429429
Bacillota
CCA
Trp
>WENV181961003
OGZO01002600
313454
Bacillota
GAA
Phe
>WENV181960799
OGZO01001250
41154
Bacillota
TAA
Leu
>WENV181961370
OGZO01007865
44859
Bacillota
AAG
Leu
>WENV181961397
OGZO01008693
44859
Bacillota
AAG
Leu
>WENV181960889
OGZO01001738
11034
Bacillota
GGA
Ser
>WENV181962009
OGZO01047053
10943
Bacillota
GGA
Ser
>WENV181962248
OGZO01108085
235290
Bacillota
TTG
Gln
>WENV181961865
OGZO01032236
296878
Bacillota
GTT
Asn
>WENV181961540
OGZO01012091
173314
Bacillota
GAT
Ile
>WENV181962022
OGZO01050243
316443
Bacillota
GTC
Asp
>WENV181961999
OGZO01046047
338149
Bacillota
CTC
Glu
>WENV181961243
OGZO01005365
245298
Bacillota
CGG
Pro
>WENV181961469
OGZO01009964
245298
Bacillota
CGG
Pro
>WENV181961521
OGZO01011595
245298
Bacillota
CGG
Pro
>WENV181961547
OGZO01012436
155089
Bacillota
CAT
Met
>WENV181962191
OGZO01091007
287000
Bacillota
GTT
Asn
>WENV181961873
OGZO01033939
37551
Bacillota
CGA
Ser
>WENV181962108
OGZO01067877
413152
Bacillota
TCC
Gly
>WENV181961816
OGZO01027318
152149
Bacillota
GTG
His
>WENV181960498
OGZO01000168
152492
Bacillota
GGG
Pro
>WENV181960819
OGZO01001294
152492
Bacillota
GGG
Pro
>WENV181961689
OGZO01020132
235078
Bacillota
TAC
Val
>WENV181960752
OGZO01001034
100326
Bacillota
GTA
Tyr
>WENV181960836
OGZO01001426
144610
Bacillota
GTG
His
>WENV181962278
OGZO01111723
240017
Bacillota
GCC
Gly
>WENV181960896
OGZO01001786
411547
Bacillota
CTG
Gln
>WENV181960973
OGZO01002347
411547
Bacillota
CTG
Gln
>WENV181961242
OGZO01005365
411547
Bacillota
CTG
Gln
>WENV181961468
OGZO01009964
411547
Bacillota
CTG
Gln
>WENV181961520
OGZO01011595
411547
Bacillota
CTG
Gln
>WENV181960671
OGZO01000664
147684
Bacillota
ACG
Arg
>WENV181961324
OGZO01006762
147684
Bacillota
ACG
Arg
>WENV181961403
OGZO01008767
147684
Bacillota
ACG
Arg
>WENV181961581
OGZO01014026
4624
Bacillota
GCT
Ser
>WENV181962012
OGZO01047652
4624
Bacillota
GCT
Ser
>WENV181960668
OGZO01000657
263765
Bacillota
TAC
Val
>WENV181960974
OGZO01002350
412387
Bacillota
GCA
Cys
>WENV181962024
OGZO01050243
109476
Bacillota
TAG
Leu
>WENV181961259
OGZO01005525
235095
Bacillota
GGT
Thr
>WENV181961516
OGZO01011548
235095
Bacillota
GGT
Thr
>WENV181961436
OGZO01009644
344183
Bacillota
CTG
Gln
>WENV181961866
OGZO01032236
344183
Bacillota
CTG
Gln
>WENV181961991
OGZO01044795
419945
Bacillota
GCA
Cys
>WENV181961964
OGZO01043272
154748
Bacillota
GTC
Asp
>WENV181962062
OGZO01056219
304759
Bacillota
TAC
Val
>WENV181961033
OGZO01002892
411549
Bacillota
TTG
Gln
>WENV181962061
OGZO01056219
243398
Bacillota
TTC
Glu
>WENV181960983
OGZO01002428
235142
Bacillota
CTT
Lys
>WENV181961367
OGZO01007720
235142
Bacillota
CTT
Lys
>WENV181961334
OGZO01006942
148188
Bacillota
CCG
Arg
>WENV181961393
OGZO01008481
148188
Bacillota
CCG
Arg
>WENV181961712
OGZO01021244
148188
Bacillota
CCG
Arg
>WENV181962272
OGZO01111317
152046
Bacillota
TCT
Arg
>WENV181960525
OGZO01000233
80612
Bacillota
GTA
Tyr
>WENV181960616
OGZO01000484
256380
Bacillota
>WENV181961017
OGZO01002741
256380
Bacillota
>WENV181960945
OGZO01002144
235127
Bacillota
TTT
Lys
>WENV181961456
OGZO01009819
163943
Bacillota
GTC
Asp
>WENV181961328
OGZO01006857
298620
Bacillota
CAT
Met
>WENV181961108
OGZO01003736
235124
Bacillota
TGG
Pro
>WENV181961262
OGZO01005622
235124
Bacillota
TGG
Pro
>WENV181961583
OGZO01014218
235124
Bacillota
TGG
Pro
>WENV181961470
OGZO01009970
338129
Bacillota
TGT
Thr
>WENV181961628
OGZO01016416
338129
Bacillota
TGT
Thr
>WENV181961715
OGZO01021378
338129
Bacillota
TGT
Thr
>WENV181961392
OGZO01008445
144583
Bacillota
ACG
Arg
>WENV181961498
OGZO01010827
247734
Bacillota
TGC
Ala
>WENV181961752
OGZO01023278
247734
Bacillota
TGC
Ala
>WENV181960382
OGZO01000015
238974
Bacillota
GAA
Phe
>WENV181961147
OGZO01004204
238974
Bacillota
GAA
Phe
>WENV181961777
OGZO01024275
144621
Bacillota
GTT
Asn
>WENV181961089
OGZO01003500
235113
Bacillota
GAA
Phe
>WENV181961011
OGZO01002694
58712
Bacillota
CAG
Leu
>WENV181961704
OGZO01020700
58712
Bacillota
CAG
Leu
>WENV181962247
OGZO01108085
144762
Bacillota
TCT
Arg
>WENV181962294
OGZO01118543
245296
Bacillota
CCC
Gly
>WENV181962000
OGZO01046047
272992
Bacillota
CTT
Lys
>WENV181962257
OGZO01109294
344240
Bacillota
GCC
Gly
>WENV181961906
OGZO01036640
198135
Bacillota
GAT
Ile
>WENV181962255
OGZO01109294
196632
Bacillota
GTC
Asp
>WENV181961905
OGZO01036640
299139
Bacillota
TGC
Ala
>WENV181961132
OGZO01004005
144594
Bacillota
CAC
Val
>WENV181961023
OGZO01002813
95563
Bacillota
GTA
Tyr
>WENV181961141
OGZO01004177
414486
Bacillota
CCC
Gly
>WENV181960813
OGZO01001271
272488
Bacillota
GAA
Phe
>WENV181960487
OGZO01000136
114075
Bacillota
TAG
Leu
>WENV181961990
OGZO01044795
384950
Bacillota
GCC
Gly
>WENV181961651
OGZO01017793
238857
Bacillota
CCA
Trp
>WENV181962287
OGZO01115238
413179
Bacillota
CCC
Gly
>WENV181962034
OGZO01050713
338128
Bacillota
TTC
Glu
>WENV181962256
OGZO01109294
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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