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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181994676
OHAT01000023
119661
Verrucomicrobiota
CAA
Leu
>WENV181994791
OHAT01000128
119661
Verrucomicrobiota
CAA
Leu
>WENV181994662
OHAT01000018
155256
Verrucomicrobiota
TCT
Arg
>WENV181994677
OHAT01000023
246701
Verrucomicrobiota
TTT
Lys
>WENV181995005
OHAT01000503
246701
Verrucomicrobiota
TTT
Lys
>WENV181994628
OHAT01000008
345141
Verrucomicrobiota
TTG
Gln
>WENV181994862
OHAT01000207
345141
Verrucomicrobiota
TTG
Gln
>WENV181995749
OHAT01008541
345133
Verrucomicrobiota
GAC
Val
>WENV181995198
OHAT01001214
82054
Verrucomicrobiota
GTA
Tyr
>WENV181994669
OHAT01000021
246677
Verrucomicrobiota
CTT
Lys
>WENV181995165
OHAT01001118
246677
Verrucomicrobiota
CTT
Lys
>WENV181995119
OHAT01000905
344844
Verrucomicrobiota
GCA
Cys
>WENV181994672
OHAT01000021
155264
Verrucomicrobiota
GGG
Pro
>WENV181994720
OHAT01000067
155264
Verrucomicrobiota
GGG
Pro
>WENV181995403
OHAT01002725
344845
Verrucomicrobiota
CTG
Gln
>WENV181994673
OHAT01000021
128202
Verrucomicrobiota
GTC
Asp
>WENV181994776
OHAT01000120
128202
Verrucomicrobiota
GTC
Asp
>WENV181994884
OHAT01000245
128202
Verrucomicrobiota
GTC
Asp
>WENV181994772
OHAT01000112
414625
Verrucomicrobiota
CCC
Gly
>WENV181995526
OHAT01003872
97755
Verrucomicrobiota
TAG
Leu
>WENV181995042
OHAT01000602
246700
Verrucomicrobiota
TTC
Glu
>WENV181994800
OHAT01000144
246687
Verrucomicrobiota
CGC
Ala
>WENV181994680
OHAT01000026
419909
Verrucomicrobiota
TCC
Gly
>WENV181994770
OHAT01000112
419909
Verrucomicrobiota
TCC
Gly
>WENV181994825
OHAT01000157
344841
Verrucomicrobiota
CAC
Val
>WENV181994886
OHAT01000249
344841
Verrucomicrobiota
CAC
Val
>WENV181995041
OHAT01000599
60880
Verrucomicrobiota
CAG
Leu
>WENV181995284
OHAT01001719
82056
Verrucomicrobiota
TAA
Leu
>WENV181995164
OHAT01001118
344842
Verrucomicrobiota
CGT
Thr
>WENV181996113
OHAT01035725
170105
Verrucomicrobiota
CAT
Met
>WENV181995295
OHAT01001791
287733
Verrucomicrobiota
CCA
Trp
>WENV181994799
OHAT01000144
345123
Verrucomicrobiota
TGT
Thr
>WENV181994863
OHAT01000210
345110
Verrucomicrobiota
CCT
Arg
>WENV181995503
OHAT01003653
344839
Verrucomicrobiota
GTG
His
>WENV181994953
OHAT01000378
7274
Verrucomicrobiota
CGA
Ser
>WENV181995108
OHAT01000880
246260
Verrucomicrobiota
>WENV181994671
OHAT01000021
155268
Verrucomicrobiota
CGG
Pro
>WENV181995501
OHAT01003553
155268
Verrucomicrobiota
CGG
Pro
>WENV181994999
OHAT01000473
82181
Verrucomicrobiota
AAG
Leu
>WENV181994622
OHAT01000007
246728
Verrucomicrobiota
GAA
Phe
>WENV181994771
OHAT01000112
246728
Verrucomicrobiota
GAA
Phe
>WENV181995109
OHAT01000880
7256
Verrucomicrobiota
GCT
Ser
>WENV181994891
OHAT01000270
345115
Verrucomicrobiota
CAT
Met
>WENV181995285
OHAT01001735
345119
Verrucomicrobiota
TAC
Val
>WENV181994792
OHAT01000129
345124
Verrucomicrobiota
GTT
Asn
>WENV181995145
OHAT01001072
345124
Verrucomicrobiota
GTT
Asn
>WENV181995402
OHAT01002714
17023
Verrucomicrobiota
GGA
Ser
>WENV181994654
OHAT01000014
368497
Verrucomicrobiota
GCC
Gly
>WENV181994713
OHAT01000064
368497
Verrucomicrobiota
GCC
Gly
>WENV181994890
OHAT01000270
368497
Verrucomicrobiota
GCC
Gly
>WENV181994980
OHAT01000428
368497
Verrucomicrobiota
GCC
Gly
>WENV181994773
OHAT01000112
345142
Verrucomicrobiota
CCG
Arg
>WENV181994666
OHAT01000021
246709
Verrucomicrobiota
CAT
Met
>WENV181995504
OHAT01003653
246709
Verrucomicrobiota
CAT
Met
>WENV181994623
OHAT01000007
154693
Verrucomicrobiota
TGG
Pro
>WENV181994652
OHAT01000013
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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