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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182003017
OHBC01000034
144657
Bacteroidota
CGG
Pro
>WENV182003070
OHBC01000098
338155
Bacteroidota
CTC
Glu
>WENV182003112
OHBC01000138
339341
Bacteroidota
GGT
Thr
>WENV182003048
OHBC01000058
343138
Bacteroidota
CCT
Arg
>WENV182003154
OHBC01000224
343138
Bacteroidota
CCT
Arg
>WENV182003266
OHBC01000773
58715
Bacteroidota
GAG
Leu
>WENV182003050
OHBC01000061
338486
Bacteroidota
CAT
Met
>WENV182003170
OHBC01000273
338486
Bacteroidota
CAT
Met
>WENV182003275
OHBC01000853
338486
Bacteroidota
CAT
Met
>WENV182003066
OHBC01000091
48053
Bacteroidota
TGA
Ser
>WENV182003171
OHBC01000274
59689
Bacteroidota
CAG
Leu
>WENV182003157
OHBC01000231
235203
Bacteroidota
TTT
Lys
>WENV182003263
OHBC01000765
235203
Bacteroidota
TTT
Lys
>WENV182003255
OHBC01000635
238121
Bacteroidota
CTT
Lys
>WENV182003127
OHBC01000173
126641
Bacteroidota
TAC
Val
>WENV182003128
OHBC01000173
126641
Bacteroidota
TAC
Val
>WENV182003082
OHBC01000114
338132
Bacteroidota
GCA
Cys
>WENV182003104
OHBC01000127
338132
Bacteroidota
GCA
Cys
>WENV182003137
OHBC01000193
338132
Bacteroidota
GCA
Cys
>WENV182003192
OHBC01000330
338132
Bacteroidota
GCA
Cys
>WENV182003177
OHBC01000288
45423
Bacteroidota
TGA
Ser
>WENV182002967
OHBC01000007
58714
Bacteroidota
CAA
Leu
>WENV182003126
OHBC01000164
144933
Bacteroidota
TCT
Arg
>WENV182003040
OHBC01000053
144933
Bacteroidota
TCT
Arg
>WENV182003142
OHBC01000205
144659
Bacteroidota
GTG
His
>WENV182003167
OHBC01000265
235180
Bacteroidota
CCA
Trp
>WENV182003123
OHBC01000158
144596
Bacteroidota
GGC
Ala
>WENV182003038
OHBC01000048
16999
Bacteroidota
GGA
Ser
>WENV182003111
OHBC01000138
80614
Bacteroidota
>WENV182003226
OHBC01000460
80614
Bacteroidota
>WENV182003049
OHBC01000058
338164
Bacteroidota
TTC
Glu
>WENV182002966
OHBC01000007
95875
Bacteroidota
TAG
Leu
>WENV182003051
OHBC01000061
240012
Bacteroidota
CCC
Gly
>WENV182003056
OHBC01000066
240012
Bacteroidota
CCC
Gly
>WENV182003185
OHBC01000302
44852
Bacteroidota
TAA
Leu
>WENV182003075
OHBC01000107
147439
Bacteroidota
TCT
Arg
>WENV182003186
OHBC01000303
411550
Bacteroidota
CTG
Gln
>WENV182003000
OHBC01000025
239647
Bacteroidota
TTT
Lys
>WENV182003161
OHBC01000239
239647
Bacteroidota
TTT
Lys
>WENV182003232
OHBC01000505
23696
Bacteroidota
GCT
Ser
>WENV182003106
OHBC01000130
338125
Bacteroidota
CCT
Arg
>WENV182003190
OHBC01000319
235129
Bacteroidota
GCC
Gly
>WENV182003047
OHBC01000057
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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