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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182006170
OHBF01000032
235102
Bacteroidota
CGT
Thr
>WENV182006552
OHBF01007454
144657
Bacteroidota
CGG
Pro
>WENV182006417
OHBF01001317
243025
Bacteroidota
CAT
Met
>WENV182006391
OHBF01000919
338155
Bacteroidota
CTC
Glu
>WENV182006195
OHBF01000080
126965
Bacteroidota
GGG
Pro
>WENV182006342
OHBF01000540
150845
Bacteroidota
GTC
Asp
>WENV182006238
OHBF01000153
343138
Bacteroidota
CCT
Arg
>WENV182006461
OHBF01002297
58715
Bacteroidota
GAG
Leu
>WENV182006580
OHBF01011898
95618
Bacteroidota
TAG
Leu
>WENV182006278
OHBF01000251
338486
Bacteroidota
CAT
Met
>WENV182006448
OHBF01001943
338486
Bacteroidota
CAT
Met
>WENV182006518
OHBF01004364
59689
Bacteroidota
CAG
Leu
>WENV182006393
OHBF01000975
80835
Bacteroidota
GTA
Tyr
>WENV182006675
OHBF01029858
235182
Bacteroidota
>WENV182006176
OHBF01000042
338124
Bacteroidota
CCG
Arg
>WENV182006396
OHBF01001084
235203
Bacteroidota
TTT
Lys
>WENV182006479
OHBF01002892
235203
Bacteroidota
TTT
Lys
>WENV182006307
OHBF01000343
238121
Bacteroidota
CTT
Lys
>WENV182006663
OHBF01027401
238121
Bacteroidota
CTT
Lys
>WENV182006288
OHBF01000274
126641
Bacteroidota
TAC
Val
>WENV182006373
OHBF01000744
126641
Bacteroidota
TAC
Val
>WENV182006231
OHBF01000137
338132
Bacteroidota
GCA
Cys
>WENV182006361
OHBF01000645
338132
Bacteroidota
GCA
Cys
>WENV182006572
OHBF01010678
144688
Bacteroidota
CAT
Met
>WENV182006308
OHBF01000343
45423
Bacteroidota
TGA
Ser
>WENV182006309
OHBF01000343
45423
Bacteroidota
TGA
Ser
>WENV182006277
OHBF01000250
58714
Bacteroidota
CAA
Leu
>WENV182006330
OHBF01000448
144933
Bacteroidota
TCT
Arg
>WENV182006168
OHBF01000029
149691
Bacteroidota
GTT
Asn
>WENV182006218
OHBF01000118
144656
Bacteroidota
GTG
His
>WENV182006240
OHBF01000155
235207
Bacteroidota
CAT
Met
>WENV182006324
OHBF01000425
144659
Bacteroidota
GTG
His
>WENV182006392
OHBF01000953
144596
Bacteroidota
GGC
Ala
>WENV182006264
OHBF01000192
80607
Bacteroidota
GTA
Tyr
>WENV182006474
OHBF01002646
16999
Bacteroidota
GGA
Ser
>WENV182006436
OHBF01001613
80614
Bacteroidota
>WENV182006367
OHBF01000690
154643
Bacteroidota
CAT
Met
>WENV182006145
OHBF01000003
95559
Bacteroidota
TAG
Leu
>WENV182006149
OHBF01000009
144655
Bacteroidota
GGC
Ala
>WENV182006239
OHBF01000153
338164
Bacteroidota
TTC
Glu
>WENV182006473
OHBF01002574
95875
Bacteroidota
TAG
Leu
>WENV182006438
OHBF01001616
240012
Bacteroidota
CCC
Gly
>WENV182006267
OHBF01000201
147439
Bacteroidota
TCT
Arg
>WENV182006405
OHBF01001194
411550
Bacteroidota
CTG
Gln
>WENV182006526
OHBF01004937
338165
Bacteroidota
GGT
Thr
>WENV182006416
OHBF01001286
239647
Bacteroidota
TTT
Lys
>WENV182006439
OHBF01001628
239647
Bacteroidota
TTT
Lys
>WENV182006203
OHBF01000087
342206
Bacteroidota
TTC
Glu
>WENV182006381
OHBF01000793
23696
Bacteroidota
GCT
Ser
>WENV182006415
OHBF01001263
414426
Bacteroidota
CTG
Gln
>WENV182006211
OHBF01000100
16224
Bacteroidota
GGA
Ser
>WENV182006304
OHBF01000338
16220
Bacteroidota
GGA
Ser
>WENV182006173
OHBF01000036
338125
Bacteroidota
CCT
Arg
>WENV182006588
OHBF01012405
338125
Bacteroidota
CCT
Arg
>WENV182006299
OHBF01000322
235129
Bacteroidota
GCC
Gly
>WENV182006153
OHBF01000014
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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