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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182008107
OHBI01016818
24650
Bacillota
TAA
Leu
>WENV182008003
OHBI01008015
202812
Bacillota
CAT
Met
>WENV182007612
OHBI01000141
235154
Bacillota
GTT
Asn
>WENV182008077
OHBI01013407
241441
Bacillota
GCC
Gly
>WENV182007614
OHBI01000141
429443
Bacillota
GCA
Cys
>WENV182007980
OHBI01006480
246023
Bacillota
TGC
Ala
>WENV182007694
OHBI01000437
59312
Bacillota
CAG
Leu
>WENV182008153
OHBI01025421
235137
Bacillota
TGC
Ala
>WENV182008196
OHBI01039967
235294
Bacillota
TGC
Ala
>WENV182007957
OHBI01005497
338143
Bacillota
CTC
Glu
>WENV182008185
OHBI01036977
198770
Bacillota
GTC
Asp
>WENV182008144
OHBI01024430
429429
Bacillota
CCA
Trp
>WENV182007658
OHBI01000281
37269
Bacillota
TGA
Ser
>WENV182007791
OHBI01001562
37269
Bacillota
TGA
Ser
>WENV182007894
OHBI01003285
155089
Bacillota
CAT
Met
>WENV182008161
OHBI01027645
413152
Bacillota
TCC
Gly
>WENV182007979
OHBI01006480
201704
Bacillota
GAT
Ile
>WENV182007900
OHBI01003360
153911
Bacillota
GAT
Ile
>WENV182007779
OHBI01001312
100326
Bacillota
GTA
Tyr
>WENV182007785
OHBI01001480
144610
Bacillota
GTG
His
>WENV182007792
OHBI01001562
10680
Bacillota
GGA
Ser
>WENV182008115
OHBI01018136
411584
Bacillota
TCC
Gly
>WENV182007579
OHBI01000055
18852
Bacillota
GCT
Ser
>WENV182007650
OHBI01000246
185292
Bacillota
ACG
Arg
>WENV182007754
OHBI01001142
419639
Bacillota
GCA
Cys
>WENV182008165
OHBI01029430
59296
Bacillota
AAG
Leu
>WENV182007826
OHBI01001930
256380
Bacillota
>WENV182007756
OHBI01001161
238974
Bacillota
GAA
Phe
>WENV182007824
OHBI01001886
238974
Bacillota
GAA
Phe
>WENV182008192
OHBI01039299
238974
Bacillota
GAA
Phe
>WENV182007753
OHBI01001142
344240
Bacillota
GCC
Gly
>WENV182007809
OHBI01001725
196632
Bacillota
GTC
Asp
>WENV182007683
OHBI01000374
343021
Bacillota
CAT
Met
>WENV182007715
OHBI01000650
414486
Bacillota
CCC
Gly
>WENV182007657
OHBI01000275
152018
Bacillota
CCT
Arg
>WENV182007884
OHBI01002988
384950
Bacillota
GCC
Gly
>WENV182007714
OHBI01000639
413179
Bacillota
CCC
Gly
>WENV182008016
OHBI01008686
273862
Bacillota
TGC
Ala
>WENV182007948
OHBI01005078
338131
Bacillota
GCC
Gly
>WENV182007912
OHBI01003862
338128
Bacillota
TTC
Glu
>WENV182007810
OHBI01001725
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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