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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182016900
OHBV01000757
196621
Bacillota
GTC
Asp
>WENV182016933
OHBV01000969
196621
Bacillota
GTC
Asp
>WENV182016969
OHBV01001461
144612
Bacillota
TCT
Arg
>WENV182016918
OHBV01000854
267556
Bacillota
TAC
Val
>WENV182016758
OHBV01000131
235098
Bacillota
GAC
Val
>WENV182016820
OHBV01000317
235098
Bacillota
GAC
Val
>WENV182016937
OHBV01001029
235098
Bacillota
GAC
Val
>WENV182017077
OHBV01003766
235098
Bacillota
GAC
Val
>WENV182016989
OHBV01001634
338152
Bacillota
TTC
Glu
>WENV182016984
OHBV01001588
44854
Bacillota
TGA
Ser
>WENV182017044
OHBV01002668
44854
Bacillota
TGA
Ser
>WENV182017071
OHBV01003536
44854
Bacillota
TGA
Ser
>WENV182017375
OHBV01042407
246023
Bacillota
TGC
Ala
>WENV182017370
OHBV01039994
235150
Bacillota
TGC
Ala
>WENV182016825
OHBV01000318
340802
Bacillota
TTG
Gln
>WENV182017186
OHBV01009411
341763
Bacillota
CTC
Glu
>WENV182016966
OHBV01001397
429429
Bacillota
CCA
Trp
>WENV182017243
OHBV01015928
429429
Bacillota
CCA
Trp
>WENV182017069
OHBV01003465
41154
Bacillota
TAA
Leu
>WENV182016838
OHBV01000369
11034
Bacillota
GGA
Ser
>WENV182016869
OHBV01000576
11034
Bacillota
GGA
Ser
>WENV182016997
OHBV01001653
274189
Bacillota
TGT
Thr
>WENV182016765
OHBV01000140
295714
Bacillota
GCC
Gly
>WENV182017169
OHBV01008131
338149
Bacillota
CTC
Glu
>WENV182016876
OHBV01000599
245298
Bacillota
CGG
Pro
>WENV182016892
OHBV01000718
245298
Bacillota
CGG
Pro
>WENV182016897
OHBV01000752
37269
Bacillota
TGA
Ser
>WENV182016964
OHBV01001393
37269
Bacillota
TGA
Ser
>WENV182016919
OHBV01000854
155089
Bacillota
CAT
Met
>WENV182016988
OHBV01001634
287000
Bacillota
GTT
Asn
>WENV182016946
OHBV01001124
162445
Bacillota
CAT
Met
>WENV182016941
OHBV01001039
152492
Bacillota
GGG
Pro
>WENV182016904
OHBV01000771
100326
Bacillota
GTA
Tyr
>WENV182017095
OHBV01004604
100326
Bacillota
GTA
Tyr
>WENV182016824
OHBV01000318
144610
Bacillota
GTG
His
>WENV182016875
OHBV01000599
411547
Bacillota
CTG
Gln
>WENV182016882
OHBV01000634
411547
Bacillota
CTG
Gln
>WENV182016891
OHBV01000718
411547
Bacillota
CTG
Gln
>WENV182016977
OHBV01001519
411547
Bacillota
CTG
Gln
>WENV182016985
OHBV01001588
4624
Bacillota
GCT
Ser
>WENV182017045
OHBV01002668
4624
Bacillota
GCT
Ser
>WENV182017072
OHBV01003536
4624
Bacillota
GCT
Ser
>WENV182017193
OHBV01010438
18852
Bacillota
GCT
Ser
>WENV182016802
OHBV01000245
235095
Bacillota
GGT
Thr
>WENV182016901
OHBV01000757
235095
Bacillota
GGT
Thr
>WENV182016934
OHBV01000969
235095
Bacillota
GGT
Thr
>WENV182017205
OHBV01011453
419639
Bacillota
GCA
Cys
>WENV182016907
OHBV01000772
411549
Bacillota
TTG
Gln
>WENV182016963
OHBV01001391
148188
Bacillota
CCG
Arg
>WENV182016987
OHBV01001631
148188
Bacillota
CCG
Arg
>WENV182017085
OHBV01004037
148188
Bacillota
CCG
Arg
>WENV182017055
OHBV01002935
80612
Bacillota
GTA
Tyr
>WENV182016736
OHBV01000081
256380
Bacillota
>WENV182017225
OHBV01013251
241432
Bacillota
TGT
Thr
>WENV182017022
OHBV01002134
235124
Bacillota
TGG
Pro
>WENV182017092
OHBV01004435
338129
Bacillota
TGT
Thr
>WENV182017182
OHBV01009110
157838
Bacillota
GTC
Asp
>WENV182017060
OHBV01003025
144583
Bacillota
ACG
Arg
>WENV182016899
OHBV01000757
235171
Bacillota
CCA
Trp
>WENV182017036
OHBV01002478
238974
Bacillota
GAA
Phe
>WENV182017365
OHBV01038515
238974
Bacillota
GAA
Phe
>WENV182016943
OHBV01001081
144621
Bacillota
GTT
Asn
>WENV182016886
OHBV01000677
58712
Bacillota
CAG
Leu
>WENV182017054
OHBV01002935
58712
Bacillota
CAG
Leu
>WENV182016863
OHBV01000511
245296
Bacillota
CCC
Gly
>WENV182016889
OHBV01000698
245296
Bacillota
CCC
Gly
>WENV182016935
OHBV01000979
245296
Bacillota
CCC
Gly
>WENV182017170
OHBV01008131
272992
Bacillota
CTT
Lys
>WENV182017204
OHBV01011453
344240
Bacillota
GCC
Gly
>WENV182017202
OHBV01011453
196632
Bacillota
GTC
Asp
>WENV182016807
OHBV01000277
144594
Bacillota
CAC
Val
>WENV182016881
OHBV01000633
414486
Bacillota
CCC
Gly
>WENV182016942
OHBV01001071
114075
Bacillota
TAG
Leu
>WENV182017362
OHBV01036673
292012
Bacillota
TGC
Ala
>WENV182017201
OHBV01011337
273862
Bacillota
TGC
Ala
>WENV182017059
OHBV01003008
338128
Bacillota
TTC
Glu
>WENV182017203
OHBV01011453
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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