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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182031603
OHCT01000003
119661
Verrucomicrobiota
CAA
Leu
>WENV182031727
OHCT01000124
155256
Verrucomicrobiota
TCT
Arg
>WENV182031675
OHCT01000039
246701
Verrucomicrobiota
TTT
Lys
>WENV182031627
OHCT01000010
345141
Verrucomicrobiota
TTG
Gln
>WENV182031680
OHCT01000047
345133
Verrucomicrobiota
GAC
Val
>WENV182031641
OHCT01000014
82054
Verrucomicrobiota
GTA
Tyr
>WENV182031742
OHCT01000163
246677
Verrucomicrobiota
CTT
Lys
>WENV182031670
OHCT01000034
344844
Verrucomicrobiota
GCA
Cys
>WENV182031679
OHCT01000044
155264
Verrucomicrobiota
GGG
Pro
>WENV182031734
OHCT01000133
344845
Verrucomicrobiota
CTG
Gln
>WENV182031693
OHCT01000060
128202
Verrucomicrobiota
GTC
Asp
>WENV182031790
OHCT01000266
128202
Verrucomicrobiota
GTC
Asp
>WENV182031651
OHCT01000024
414625
Verrucomicrobiota
CCC
Gly
>WENV182031676
OHCT01000040
46246
Verrucomicrobiota
TGA
Ser
>WENV182031604
OHCT01000003
97755
Verrucomicrobiota
TAG
Leu
>WENV182031671
OHCT01000034
246700
Verrucomicrobiota
TTC
Glu
>WENV182031673
OHCT01000037
246700
Verrucomicrobiota
TTC
Glu
>WENV182031690
OHCT01000057
246687
Verrucomicrobiota
CGC
Ala
>WENV182031629
OHCT01000010
344841
Verrucomicrobiota
CAC
Val
>WENV182031706
OHCT01000076
60880
Verrucomicrobiota
CAG
Leu
>WENV182031606
OHCT01000003
82056
Verrucomicrobiota
TAA
Leu
>WENV182031741
OHCT01000163
344842
Verrucomicrobiota
CGT
Thr
>WENV182031644
OHCT01000016
170105
Verrucomicrobiota
CAT
Met
>WENV182031685
OHCT01000054
287733
Verrucomicrobiota
CCA
Trp
>WENV182031689
OHCT01000057
345123
Verrucomicrobiota
TGT
Thr
>WENV182031605
OHCT01000003
345110
Verrucomicrobiota
CCT
Arg
>WENV182031667
OHCT01000034
344839
Verrucomicrobiota
GTG
His
>WENV182031720
OHCT01000106
7274
Verrucomicrobiota
CGA
Ser
>WENV182031607
OHCT01000003
246260
Verrucomicrobiota
>WENV182031743
OHCT01000163
155268
Verrucomicrobiota
CGG
Pro
>WENV182031649
OHCT01000024
246728
Verrucomicrobiota
GAA
Phe
>WENV182031608
OHCT01000003
7256
Verrucomicrobiota
GCT
Ser
>WENV182031674
OHCT01000037
345115
Verrucomicrobiota
CAT
Met
>WENV182031677
OHCT01000042
345119
Verrucomicrobiota
TAC
Val
>WENV182031726
OHCT01000116
345124
Verrucomicrobiota
GTT
Asn
>WENV182031672
OHCT01000037
368497
Verrucomicrobiota
GCC
Gly
>WENV182031811
OHCT01000347
368497
Verrucomicrobiota
GCC
Gly
>WENV182031652
OHCT01000024
345142
Verrucomicrobiota
CCG
Arg
>WENV182031668
OHCT01000034
246709
Verrucomicrobiota
CAT
Met
>WENV182031650
OHCT01000024
154693
Verrucomicrobiota
TGG
Pro
>WENV182031684
OHCT01000054
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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