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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182036897
OHDC01017680
196621
Bacillota
GTC
Asp
>WENV182036968
OHDC01025798
155958
Bacillota
GAT
Ile
>WENV182036701
OHDC01005511
158247
Bacillota
>WENV182036777
OHDC01008870
144612
Bacillota
TCT
Arg
>WENV182036837
OHDC01012710
154063
Bacillota
CGG
Pro
>WENV182036753
OHDC01007469
235134
Bacillota
GAA
Phe
>WENV182036800
OHDC01009876
235098
Bacillota
GAC
Val
>WENV182037083
OHDC01055461
338152
Bacillota
TTC
Glu
>WENV182036502
OHDC01001169
148239
Bacillota
TCT
Arg
>WENV182036714
OHDC01006068
44854
Bacillota
TGA
Ser
>WENV182036630
OHDC01002810
37071
Bacillota
TGA
Ser
>WENV182036895
OHDC01017680
304022
Bacillota
GCC
Gly
>WENV182037040
OHDC01040293
429443
Bacillota
GCA
Cys
>WENV182037079
OHDC01055255
307003
Bacillota
TGC
Ala
>WENV182036445
OHDC01000775
59312
Bacillota
CAG
Leu
>WENV182036496
OHDC01001157
238910
Bacillota
CTT
Lys
>WENV182036765
OHDC01008184
238910
Bacillota
CTT
Lys
>WENV182036415
OHDC01000576
338147
Bacillota
CTC
Glu
>WENV182036534
OHDC01001497
338147
Bacillota
CTC
Glu
>WENV182036535
OHDC01001497
338147
Bacillota
CTC
Glu
>WENV182037077
OHDC01055149
235150
Bacillota
TGC
Ala
>WENV182037005
OHDC01032980
235137
Bacillota
TGC
Ala
>WENV182036438
OHDC01000732
235114
Bacillota
TTT
Lys
>WENV182036460
OHDC01000849
429429
Bacillota
CCA
Trp
>WENV182036444
OHDC01000775
44859
Bacillota
AAG
Leu
>WENV182037021
OHDC01036071
11034
Bacillota
GGA
Ser
>WENV182036896
OHDC01017680
235117
Bacillota
TAC
Val
>WENV182036329
OHDC01000238
235079
Bacillota
GAA
Phe
>WENV182036724
OHDC01006610
173314
Bacillota
GAT
Ile
>WENV182036673
OHDC01004585
338149
Bacillota
CTC
Glu
>WENV182036366
OHDC01000350
271471
Bacillota
GCC
Gly
>WENV182036939
OHDC01021379
245298
Bacillota
CGG
Pro
>WENV182036422
OHDC01000636
155089
Bacillota
CAT
Met
>WENV182037082
OHDC01055461
287000
Bacillota
GTT
Asn
>WENV182036975
OHDC01026620
413152
Bacillota
TCC
Gly
>WENV182036327
OHDC01000238
235078
Bacillota
TAC
Val
>WENV182036854
OHDC01014010
153911
Bacillota
GAT
Ile
>WENV182036407
OHDC01000532
100326
Bacillota
GTA
Tyr
>WENV182036449
OHDC01000781
100326
Bacillota
GTA
Tyr
>WENV182036503
OHDC01001169
144610
Bacillota
GTG
His
>WENV182036754
OHDC01007469
240017
Bacillota
GCC
Gly
>WENV182036938
OHDC01021379
411547
Bacillota
CTG
Gln
>WENV182037101
OHDC01060223
147684
Bacillota
ACG
Arg
>WENV182036715
OHDC01006068
4624
Bacillota
GCT
Ser
>WENV182036363
OHDC01000350
263765
Bacillota
TAC
Val
>WENV182036668
OHDC01004495
412387
Bacillota
GCA
Cys
>WENV182036898
OHDC01017680
235095
Bacillota
GGT
Thr
>WENV182037062
OHDC01048245
411549
Bacillota
TTG
Gln
>WENV182036955
OHDC01023254
235142
Bacillota
CTT
Lys
>WENV182036499
OHDC01001157
245386
Bacillota
CCA
Trp
>WENV182036671
OHDC01004562
148188
Bacillota
CCG
Arg
>WENV182036303
OHDC01000188
256380
Bacillota
>WENV182036755
OHDC01007490
243401
Bacillota
CGT
Thr
>WENV182037014
OHDC01033977
163943
Bacillota
GTC
Asp
>WENV182036385
OHDC01000419
298620
Bacillota
CAT
Met
>WENV182036728
OHDC01006745
235124
Bacillota
TGG
Pro
>WENV182037107
OHDC01062100
338129
Bacillota
TGT
Thr
>WENV182036451
OHDC01000781
238974
Bacillota
GAA
Phe
>WENV182036674
OHDC01004585
144621
Bacillota
GTT
Asn
>WENV182036437
OHDC01000732
235113
Bacillota
GAA
Phe
>WENV182037066
OHDC01050370
21693
Bacillota
GCT
Ser
>WENV182037055
OHDC01046780
245296
Bacillota
CCC
Gly
>WENV182036924
OHDC01020142
198135
Bacillota
GAT
Ile
>WENV182036923
OHDC01020142
299139
Bacillota
TGC
Ala
>WENV182036851
OHDC01013912
144594
Bacillota
CAC
Val
>WENV182036380
OHDC01000390
338127
Bacillota
TTG
Gln
>WENV182036395
OHDC01000455
414486
Bacillota
CCC
Gly
>WENV182036527
OHDC01001410
114075
Bacillota
TAG
Leu
>WENV182036684
OHDC01004679
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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