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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182040118
OHDG01046937
235153
Actinomycetota
CCT
Arg
>WENV182040022
OHDG01029234
144589
Actinomycetota
ACG
Arg
>WENV182039959
OHDG01013726
37070
Actinomycetota
CGA
Ser
>WENV182040115
OHDG01046140
235092
Actinomycetota
CCG
Arg
>WENV182040068
OHDG01037448
245301
Actinomycetota
GCC
Gly
>WENV182039983
OHDG01017478
235101
Actinomycetota
TTT
Lys
>WENV182039975
OHDG01016864
144625
Actinomycetota
GTC
Asp
>WENV182039990
OHDG01020234
198659
Actinomycetota
TAC
Val
>WENV182039966
OHDG01015263
144593
Actinomycetota
TAT
Ile
>WENV182040063
OHDG01036208
144636
Actinomycetota
GAT
Ile
>WENV182040126
OHDG01051665
98279
Actinomycetota
GTA
Tyr
>WENV182040056
OHDG01035766
338148
Actinomycetota
CTG
Gln
>WENV182040069
OHDG01037525
235148
Actinomycetota
GTT
Asn
>WENV182040117
OHDG01046450
411554
Actinomycetota
CCC
Gly
>WENV182039930
OHDG01011425
44851
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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