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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182040437
OHDH01001075
196621
Bacillota
GTC
Asp
>WENV182040828
OHDH01015655
144612
Bacillota
TCT
Arg
>WENV182040384
OHDH01000651
235098
Bacillota
GAC
Val
>WENV182040414
OHDH01000860
235098
Bacillota
GAC
Val
>WENV182040787
OHDH01012176
235098
Bacillota
GAC
Val
>WENV182040298
OHDH01000199
338152
Bacillota
TTC
Glu
>WENV182040625
OHDH01004272
44854
Bacillota
TGA
Ser
>WENV182040644
OHDH01004704
44854
Bacillota
TGA
Ser
>WENV182040954
OHDH01037281
246023
Bacillota
TGC
Ala
>WENV182040475
OHDH01001403
59312
Bacillota
CAG
Leu
>WENV182040822
OHDH01015425
238910
Bacillota
CTT
Lys
>WENV182040889
OHDH01024701
340802
Bacillota
TTG
Gln
>WENV182040743
OHDH01009283
341763
Bacillota
CTC
Glu
>WENV182040450
OHDH01001136
429429
Bacillota
CCA
Trp
>WENV182040725
OHDH01008428
429429
Bacillota
CCA
Trp
>WENV182040544
OHDH01002601
41154
Bacillota
TAA
Leu
>WENV182040341
OHDH01000405
11034
Bacillota
GGA
Ser
>WENV182040433
OHDH01001065
11034
Bacillota
GGA
Ser
>WENV182040764
OHDH01010612
11034
Bacillota
GGA
Ser
>WENV182040415
OHDH01000864
338149
Bacillota
CTC
Glu
>WENV182040530
OHDH01002363
338149
Bacillota
CTC
Glu
>WENV182040629
OHDH01004351
338149
Bacillota
CTC
Glu
>WENV182040453
OHDH01001180
245298
Bacillota
CGG
Pro
>WENV182040864
OHDH01021483
37269
Bacillota
TGA
Ser
>WENV182040501
OHDH01001744
155089
Bacillota
CAT
Met
>WENV182040297
OHDH01000199
287000
Bacillota
GTT
Asn
>WENV182040932
OHDH01031945
162445
Bacillota
CAT
Met
>WENV182040890
OHDH01024871
201704
Bacillota
GAT
Ile
>WENV182040385
OHDH01000656
152492
Bacillota
GGG
Pro
>WENV182040539
OHDH01002588
144599
Bacillota
GTC
Asp
>WENV182040929
OHDH01031666
153911
Bacillota
GAT
Ile
>WENV182040546
OHDH01002665
100326
Bacillota
GTA
Tyr
>WENV182040888
OHDH01024701
144610
Bacillota
GTG
His
>WENV182040492
OHDH01001531
411547
Bacillota
CTG
Gln
>WENV182040703
OHDH01007677
411547
Bacillota
CTG
Gln
>WENV182040353
OHDH01000483
147684
Bacillota
ACG
Arg
>WENV182040626
OHDH01004272
4624
Bacillota
GCT
Ser
>WENV182040645
OHDH01004704
4624
Bacillota
GCT
Ser
>WENV182040435
OHDH01001075
235095
Bacillota
GGT
Thr
>WENV182040438
OHDH01001075
235095
Bacillota
GGT
Thr
>WENV182040482
OHDH01001450
235095
Bacillota
GGT
Thr
>WENV182040582
OHDH01003346
419639
Bacillota
GCA
Cys
>WENV182040646
OHDH01004766
411549
Bacillota
TTG
Gln
>WENV182040454
OHDH01001191
148188
Bacillota
CCG
Arg
>WENV182040520
OHDH01002144
148188
Bacillota
CCG
Arg
>WENV182040721
OHDH01008262
148188
Bacillota
CCG
Arg
>WENV182040897
OHDH01025743
298639
Bacillota
GTT
Asn
>WENV182040388
OHDH01000683
80612
Bacillota
GTA
Tyr
>WENV182040461
OHDH01001274
235124
Bacillota
TGG
Pro
>WENV182040716
OHDH01008000
338129
Bacillota
TGT
Thr
>WENV182040458
OHDH01001261
144583
Bacillota
ACG
Arg
>WENV182040436
OHDH01001075
235171
Bacillota
CCA
Trp
>WENV182040416
OHDH01000864
144621
Bacillota
GTT
Asn
>WENV182040531
OHDH01002363
144621
Bacillota
GTT
Asn
>WENV182040595
OHDH01003618
144621
Bacillota
GTT
Asn
>WENV182040630
OHDH01004351
144621
Bacillota
GTT
Asn
>WENV182040572
OHDH01003149
243098
Bacillota
GGT
Thr
>WENV182040380
OHDH01000621
58712
Bacillota
CAG
Leu
>WENV182040387
OHDH01000683
58712
Bacillota
CAG
Leu
>WENV182040460
OHDH01001273
58712
Bacillota
CAG
Leu
>WENV182040339
OHDH01000400
245296
Bacillota
CCC
Gly
>WENV182040681
OHDH01006115
245296
Bacillota
CCC
Gly
>WENV182040581
OHDH01003346
344240
Bacillota
GCC
Gly
>WENV182040759
OHDH01010109
198135
Bacillota
GAT
Ile
>WENV182040753
OHDH01009944
196632
Bacillota
GTC
Asp
>WENV182040758
OHDH01010109
299139
Bacillota
TGC
Ala
>WENV182040498
OHDH01001689
144594
Bacillota
CAC
Val
>WENV182040500
OHDH01001728
144594
Bacillota
CAC
Val
>WENV182040335
OHDH01000371
414486
Bacillota
CCC
Gly
>WENV182040609
OHDH01004035
272488
Bacillota
GAA
Phe
>WENV182040861
OHDH01021077
114075
Bacillota
TAG
Leu
>WENV182040747
OHDH01009565
292012
Bacillota
TGC
Ala
>WENV182040913
OHDH01029185
273862
Bacillota
TGC
Ala
>WENV182040366
OHDH01000562
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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