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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182042895
OHDP01000087
235097
Bacteroidota
TTT
Lys
>WENV182043097
OHDP01000908
235102
Bacteroidota
CGT
Thr
>WENV182043328
OHDP01008362
144657
Bacteroidota
CGG
Pro
>WENV182043285
OHDP01005148
338155
Bacteroidota
CTC
Glu
>WENV182043228
OHDP01002715
343138
Bacteroidota
CCT
Arg
>WENV182043105
OHDP01000986
46165
Bacteroidota
TGA
Ser
>WENV182043357
OHDP01011869
235817
Bacteroidota
GAA
Phe
>WENV182043309
OHDP01006397
338486
Bacteroidota
CAT
Met
>WENV182043155
OHDP01001286
59689
Bacteroidota
CAG
Leu
>WENV182043084
OHDP01000791
80835
Bacteroidota
GTA
Tyr
>WENV182043150
OHDP01001240
80835
Bacteroidota
GTA
Tyr
>WENV182042845
OHDP01000007
338124
Bacteroidota
CCG
Arg
>WENV182042952
OHDP01000231
338124
Bacteroidota
CCG
Arg
>WENV182043312
OHDP01006438
146800
Bacteroidota
>WENV182043227
OHDP01002681
235203
Bacteroidota
TTT
Lys
>WENV182043116
OHDP01001047
338132
Bacteroidota
GCA
Cys
>WENV182043340
OHDP01009997
58714
Bacteroidota
CAA
Leu
>WENV182043051
OHDP01000640
149691
Bacteroidota
GTT
Asn
>WENV182042870
OHDP01000039
144656
Bacteroidota
GTG
His
>WENV182042923
OHDP01000156
235207
Bacteroidota
CAT
Met
>WENV182042938
OHDP01000193
235207
Bacteroidota
CAT
Met
>WENV182042975
OHDP01000280
235207
Bacteroidota
CAT
Met
>WENV182043323
OHDP01008082
144659
Bacteroidota
GTG
His
>WENV182043027
OHDP01000458
144596
Bacteroidota
GGC
Ala
>WENV182042848
OHDP01000013
80607
Bacteroidota
GTA
Tyr
>WENV182043036
OHDP01000535
80607
Bacteroidota
GTA
Tyr
>WENV182043133
OHDP01001153
16999
Bacteroidota
GGA
Ser
>WENV182043169
OHDP01001548
16999
Bacteroidota
GGA
Ser
>WENV182043205
OHDP01002242
154643
Bacteroidota
CAT
Met
>WENV182042915
OHDP01000133
144590
Bacteroidota
GTT
Asn
>WENV182042884
OHDP01000064
95559
Bacteroidota
TAG
Leu
>WENV182043229
OHDP01002715
338164
Bacteroidota
TTC
Glu
>WENV182042849
OHDP01000014
240012
Bacteroidota
CCC
Gly
>WENV182042897
OHDP01000088
44852
Bacteroidota
TAA
Leu
>WENV182043324
OHDP01008118
147439
Bacteroidota
TCT
Arg
>WENV182043153
OHDP01001270
342206
Bacteroidota
TTC
Glu
>WENV182043279
OHDP01004770
23696
Bacteroidota
GCT
Ser
>WENV182043217
OHDP01002481
16224
Bacteroidota
GGA
Ser
>WENV182042918
OHDP01000141
16220
Bacteroidota
GGA
Ser
>WENV182043341
OHDP01010262
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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