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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182043519
OHDQ01000173
37213
Bacillota
TGA
Ser
>WENV182043586
OHDQ01000460
154063
Bacillota
CGG
Pro
>WENV182043589
OHDQ01000489
154063
Bacillota
CGG
Pro
>WENV182043729
OHDQ01006591
235098
Bacillota
GAC
Val
>WENV182043522
OHDQ01000178
23769
Bacillota
TAA
Leu
>WENV182043507
OHDQ01000119
235154
Bacillota
GTT
Asn
>WENV182043780
OHDQ01013806
246023
Bacillota
TGC
Ala
>WENV182043514
OHDQ01000135
59312
Bacillota
CAG
Leu
>WENV182043555
OHDQ01000317
338147
Bacillota
CTC
Glu
>WENV182043758
OHDQ01010379
235150
Bacillota
TGC
Ala
>WENV182043587
OHDQ01000460
338143
Bacillota
CTC
Glu
>WENV182043590
OHDQ01000489
338143
Bacillota
CTC
Glu
>WENV182043521
OHDQ01000178
144668
Bacillota
GTC
Asp
>WENV182043792
OHDQ01014855
144668
Bacillota
GTC
Asp
>WENV182043826
OHDQ01021343
235091
Bacillota
CTT
Lys
>WENV182043787
OHDQ01014731
247057
Bacillota
TGC
Ala
>WENV182043599
OHDQ01000619
156937
Bacillota
GTG
His
>WENV182043777
OHDQ01013637
235079
Bacillota
GAA
Phe
>WENV182043716
OHDQ01005413
235087
Bacillota
TGC
Ala
>WENV182043691
OHDQ01004045
245298
Bacillota
CGG
Pro
>WENV182043720
OHDQ01006068
340131
Bacillota
GTT
Asn
>WENV182043492
OHDQ01000066
155089
Bacillota
CAT
Met
>WENV182043494
OHDQ01000066
155089
Bacillota
CAT
Met
>WENV182043456
OHDQ01000025
152492
Bacillota
GGG
Pro
>WENV182043552
OHDQ01000288
152492
Bacillota
GGG
Pro
>WENV182043690
OHDQ01004045
411547
Bacillota
CTG
Gln
>WENV182043510
OHDQ01000120
147684
Bacillota
ACG
Arg
>WENV182043525
OHDQ01000181
147684
Bacillota
ACG
Arg
>WENV182043698
OHDQ01004341
412387
Bacillota
GCA
Cys
>WENV182043812
OHDQ01017988
235095
Bacillota
GGT
Thr
>WENV182043746
OHDQ01007702
411549
Bacillota
TTG
Gln
>WENV182043773
OHDQ01013105
245386
Bacillota
CCA
Trp
>WENV182043656
OHDQ01002342
59296
Bacillota
AAG
Leu
>WENV182043778
OHDQ01013658
148188
Bacillota
CCG
Arg
>WENV182043737
OHDQ01007024
237846
Bacillota
GCC
Gly
>WENV182043804
OHDQ01016848
235124
Bacillota
TGG
Pro
>WENV182043838
OHDQ01026415
58712
Bacillota
CAG
Leu
>WENV182043642
OHDQ01001836
344240
Bacillota
GCC
Gly
>WENV182043542
OHDQ01000238
238945
Bacillota
GCC
Gly
>WENV182043571
OHDQ01000391
238945
Bacillota
GCC
Gly
>WENV182043759
OHDQ01010668
249259
Bacillota
GCC
Gly
>WENV182043809
OHDQ01017469
338128
Bacillota
TTC
Glu
>WENV182043641
OHDQ01001836
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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