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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182049250
OHEC01000215
235097
Bacteroidota
TTT
Lys
>WENV182049164
OHEC01000032
235102
Bacteroidota
CGT
Thr
>WENV182049851
OHEC01031728
146761
Bacteroidota
GAT
Ile
>WENV182049234
OHEC01000140
144657
Bacteroidota
CGG
Pro
>WENV182049291
OHEC01000379
243025
Bacteroidota
CAT
Met
>WENV182049756
OHEC01015274
153993
Bacteroidota
GAT
Ile
>WENV182049299
OHEC01000395
339341
Bacteroidota
GGT
Thr
>WENV182049136
OHEC01000010
343138
Bacteroidota
CCT
Arg
>WENV182049244
OHEC01000171
58715
Bacteroidota
GAG
Leu
>WENV182049268
OHEC01000271
46165
Bacteroidota
TGA
Ser
>WENV182049632
OHEC01007027
17323
Bacteroidota
GGA
Ser
>WENV182049661
OHEC01008152
95618
Bacteroidota
TAG
Leu
>WENV182049344
OHEC01000670
338486
Bacteroidota
CAT
Met
>WENV182049322
OHEC01000495
411543
Bacteroidota
CTG
Gln
>WENV182049243
OHEC01000171
59689
Bacteroidota
CAG
Leu
>WENV182049186
OHEC01000062
436206
Bacteroidota
TTG
Gln
>WENV182049290
OHEC01000376
436206
Bacteroidota
TTG
Gln
>WENV182049242
OHEC01000170
20893
Bacteroidota
GGA
Ser
>WENV182049269
OHEC01000271
20893
Bacteroidota
GGA
Ser
>WENV182049768
OHEC01016349
344692
Bacteroidota
GGT
Thr
>WENV182049270
OHEC01000287
235182
Bacteroidota
>WENV182049246
OHEC01000177
338124
Bacteroidota
CCG
Arg
>WENV182049181
OHEC01000052
235203
Bacteroidota
TTT
Lys
>WENV182049262
OHEC01000254
338132
Bacteroidota
GCA
Cys
>WENV182049334
OHEC01000635
338132
Bacteroidota
GCA
Cys
>WENV182049572
OHEC01004947
181746
Bacteroidota
GGC
Ala
>WENV182049300
OHEC01000407
58714
Bacteroidota
CAA
Leu
>WENV182049193
OHEC01000076
301449
Bacteroidota
CGG
Pro
>WENV182049515
OHEC01003257
144933
Bacteroidota
TCT
Arg
>WENV182049778
OHEC01018802
144933
Bacteroidota
TCT
Arg
>WENV182049196
OHEC01000083
144656
Bacteroidota
GTG
His
>WENV182049190
OHEC01000073
235207
Bacteroidota
CAT
Met
>WENV182049297
OHEC01000395
144659
Bacteroidota
GTG
His
>WENV182049235
OHEC01000140
235180
Bacteroidota
CCA
Trp
>WENV182049143
OHEC01000019
80607
Bacteroidota
GTA
Tyr
>WENV182049298
OHEC01000395
80614
Bacteroidota
>WENV182049144
OHEC01000020
52358
Bacteroidota
TGA
Ser
>WENV182049537
OHEC01003399
52358
Bacteroidota
TGA
Ser
>WENV182049496
OHEC01002813
154643
Bacteroidota
CAT
Met
>WENV182049221
OHEC01000124
144590
Bacteroidota
GTT
Asn
>WENV182049286
OHEC01000357
95559
Bacteroidota
TAG
Leu
>WENV182049237
OHEC01000143
419272
Bacteroidota
CTG
Gln
>WENV182049173
OHEC01000044
144655
Bacteroidota
GGC
Ala
>WENV182049137
OHEC01000010
338164
Bacteroidota
TTC
Glu
>WENV182049370
OHEC01000853
95875
Bacteroidota
TAG
Leu
>WENV182049700
OHEC01010376
338314
Bacteroidota
CCT
Arg
>WENV182049491
OHEC01002583
139743
Bacteroidota
GGG
Pro
>WENV182049148
OHEC01000022
44852
Bacteroidota
TAA
Leu
>WENV182049228
OHEC01000133
147439
Bacteroidota
TCT
Arg
>WENV182049333
OHEC01000632
150485
Bacteroidota
GTT
Asn
>WENV182049165
OHEC01000034
411550
Bacteroidota
CTG
Gln
>WENV182049138
OHEC01000011
425638
Bacteroidota
CTG
Gln
>WENV182049408
OHEC01001396
353927
Bacteroidota
TTC
Glu
>WENV182049600
OHEC01005661
139062
Bacteroidota
TGG
Pro
>WENV182049419
OHEC01001498
23696
Bacteroidota
GCT
Ser
>WENV182049594
OHEC01005533
414426
Bacteroidota
CTG
Gln
>WENV182049612
OHEC01006072
16224
Bacteroidota
GGA
Ser
>WENV182049197
OHEC01000083
16224
Bacteroidota
GGA
Ser
>WENV182049195
OHEC01000080
16220
Bacteroidota
GGA
Ser
>WENV182049146
OHEC01000022
338125
Bacteroidota
CCT
Arg
>WENV182049255
OHEC01000227
235129
Bacteroidota
GCC
Gly
>WENV182049327
OHEC01000564
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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