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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182054573
OHEK01002269
119661
Verrucomicrobiota
CAA
Leu
>WENV182054499
OHEK01000770
155256
Verrucomicrobiota
TCT
Arg
>WENV182054724
OHEK01011684
246701
Verrucomicrobiota
TTT
Lys
>WENV182054591
OHEK01002590
345141
Verrucomicrobiota
TTG
Gln
>WENV182054671
OHEK01006306
345133
Verrucomicrobiota
GAC
Val
>WENV182054422
OHEK01000229
82054
Verrucomicrobiota
GTA
Tyr
>WENV182054580
OHEK01002375
246677
Verrucomicrobiota
CTT
Lys
>WENV182054516
OHEK01001102
155264
Verrucomicrobiota
GGG
Pro
>WENV182054596
OHEK01002762
344845
Verrucomicrobiota
CTG
Gln
>WENV182054589
OHEK01002548
128202
Verrucomicrobiota
GTC
Asp
>WENV182054804
OHEK01025376
46246
Verrucomicrobiota
TGA
Ser
>WENV182054595
OHEK01002750
246700
Verrucomicrobiota
TTC
Glu
>WENV182054611
OHEK01003440
246687
Verrucomicrobiota
CGC
Ala
>WENV182054719
OHEK01011562
419909
Verrucomicrobiota
TCC
Gly
>WENV182054688
OHEK01007737
344841
Verrucomicrobiota
CAC
Val
>WENV182054583
OHEK01002433
82056
Verrucomicrobiota
TAA
Leu
>WENV182054579
OHEK01002375
344842
Verrucomicrobiota
CGT
Thr
>WENV182054619
OHEK01003927
170105
Verrucomicrobiota
CAT
Met
>WENV182054820
OHEK01028973
287733
Verrucomicrobiota
CCA
Trp
>WENV182054483
OHEK01000602
345123
Verrucomicrobiota
TGT
Thr
>WENV182054680
OHEK01007271
345110
Verrucomicrobiota
CCT
Arg
>WENV182054602
OHEK01003000
344839
Verrucomicrobiota
GTG
His
>WENV182054494
OHEK01000686
7274
Verrucomicrobiota
CGA
Ser
>WENV182054659
OHEK01005312
155268
Verrucomicrobiota
CGG
Pro
>WENV182054564
OHEK01002084
246728
Verrucomicrobiota
GAA
Phe
>WENV182054502
OHEK01000858
7256
Verrucomicrobiota
GCT
Ser
>WENV182054639
OHEK01004366
345115
Verrucomicrobiota
CAT
Met
>WENV182054606
OHEK01003243
345119
Verrucomicrobiota
TAC
Val
>WENV182054421
OHEK01000229
345124
Verrucomicrobiota
GTT
Asn
>WENV182054578
OHEK01002361
368497
Verrucomicrobiota
GCC
Gly
>WENV182054600
OHEK01002916
345142
Verrucomicrobiota
CCG
Arg
>WENV182054623
OHEK01004006
246709
Verrucomicrobiota
CAT
Met
>WENV182054565
OHEK01002084
154693
Verrucomicrobiota
TGG
Pro
>WENV182054503
OHEK01000868
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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