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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182064141
OHEZ01000008
235097
Bacteroidota
TTT
Lys
>WENV182064224
OHEZ01000140
95987
Bacteroidota
CAA
Leu
>WENV182064185
OHEZ01000063
339412
Bacteroidota
GGT
Thr
>WENV182064338
OHEZ01000428
235102
Bacteroidota
CGT
Thr
>WENV182064200
OHEZ01000083
338155
Bacteroidota
CTC
Glu
>WENV182064827
OHEZ01017765
338486
Bacteroidota
CAT
Met
>WENV182064207
OHEZ01000100
413663
Bacteroidota
CTG
Gln
>WENV182064138
OHEZ01000006
415410
Bacteroidota
TTG
Gln
>WENV182064658
OHEZ01004012
411543
Bacteroidota
CTG
Gln
>WENV182064186
OHEZ01000063
237797
Bacteroidota
CCA
Trp
>WENV182064807
OHEZ01014062
20893
Bacteroidota
GGA
Ser
>WENV182064189
OHEZ01000065
412479
Bacteroidota
TTG
Gln
>WENV182064192
OHEZ01000066
147147
Bacteroidota
GTG
His
>WENV182064405
OHEZ01000697
145504
Bacteroidota
TGT
Thr
>WENV182064147
OHEZ01000015
338124
Bacteroidota
CCG
Arg
>WENV182064897
OHEZ01031747
238121
Bacteroidota
CTT
Lys
>WENV182064898
OHEZ01031747
238121
Bacteroidota
CTT
Lys
>WENV182064519
OHEZ01001388
338132
Bacteroidota
GCA
Cys
>WENV182064190
OHEZ01000065
37076
Bacteroidota
TAA
Leu
>WENV182064842
OHEZ01019859
181746
Bacteroidota
GGC
Ala
>WENV182064892
OHEZ01030668
58714
Bacteroidota
CAA
Leu
>WENV182064377
OHEZ01000576
301449
Bacteroidota
CGG
Pro
>WENV182064767
OHEZ01009544
144933
Bacteroidota
TCT
Arg
>WENV182064170
OHEZ01000035
144656
Bacteroidota
GTG
His
>WENV182064256
OHEZ01000202
235207
Bacteroidota
CAT
Met
>WENV182064193
OHEZ01000067
144596
Bacteroidota
GGC
Ala
>WENV182064202
OHEZ01000084
80607
Bacteroidota
GTA
Tyr
>WENV182064203
OHEZ01000086
80607
Bacteroidota
GTA
Tyr
>WENV182064393
OHEZ01000664
344769
Bacteroidota
CTC
Glu
>WENV182064163
OHEZ01000027
52358
Bacteroidota
TGA
Ser
>WENV182064317
OHEZ01000342
52358
Bacteroidota
TGA
Ser
>WENV182064522
OHEZ01001406
52358
Bacteroidota
TGA
Ser
>WENV182064775
OHEZ01010140
154643
Bacteroidota
CAT
Met
>WENV182064848
OHEZ01021593
175704
Bacteroidota
TGC
Ala
>WENV182064324
OHEZ01000356
95559
Bacteroidota
TAG
Leu
>WENV182064340
OHEZ01000436
419272
Bacteroidota
CTG
Gln
>WENV182064283
OHEZ01000240
144655
Bacteroidota
GGC
Ala
>WENV182064768
OHEZ01009605
338164
Bacteroidota
TTC
Glu
>WENV182064860
OHEZ01024171
338314
Bacteroidota
CCT
Arg
>WENV182064872
OHEZ01026103
150485
Bacteroidota
GTT
Asn
>WENV182064873
OHEZ01026103
150485
Bacteroidota
GTT
Asn
>WENV182064960
OHEZ01047218
411550
Bacteroidota
CTG
Gln
>WENV182064573
OHEZ01002229
338165
Bacteroidota
GGT
Thr
>WENV182064251
OHEZ01000188
196394
Bacteroidota
GTC
Asp
>WENV182064567
OHEZ01002162
132360
Bacteroidota
GGG
Pro
>WENV182064309
OHEZ01000320
425638
Bacteroidota
CTG
Gln
>WENV182064199
OHEZ01000083
23696
Bacteroidota
GCT
Ser
>WENV182064760
OHEZ01008991
414426
Bacteroidota
CTG
Gln
>WENV182064171
OHEZ01000035
16224
Bacteroidota
GGA
Ser
>WENV182064284
OHEZ01000241
16220
Bacteroidota
GGA
Ser
>WENV182064156
OHEZ01000024
338125
Bacteroidota
CCT
Arg
>WENV182064221
OHEZ01000122
338125
Bacteroidota
CCT
Arg
>WENV182064934
OHEZ01039900
235129
Bacteroidota
GCC
Gly
>WENV182064744
OHEZ01008121
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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