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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182065610
OHFA01014531
119661
Verrucomicrobiota
CAA
Leu
>WENV182065481
OHFA01005881
246701
Verrucomicrobiota
TTT
Lys
>WENV182065651
OHFA01019872
82054
Verrucomicrobiota
GTA
Tyr
>WENV182065512
OHFA01007042
246677
Verrucomicrobiota
CTT
Lys
>WENV182065390
OHFA01002845
155264
Verrucomicrobiota
GGG
Pro
>WENV182065533
OHFA01008407
344845
Verrucomicrobiota
CTG
Gln
>WENV182065629
OHFA01016978
128202
Verrucomicrobiota
GTC
Asp
>WENV182065598
OHFA01014193
46246
Verrucomicrobiota
TGA
Ser
>WENV182065648
OHFA01019646
97755
Verrucomicrobiota
TAG
Leu
>WENV182065331
OHFA01001840
246700
Verrucomicrobiota
TTC
Glu
>WENV182065650
OHFA01019747
246687
Verrucomicrobiota
CGC
Ala
>WENV182065577
OHFA01012013
344841
Verrucomicrobiota
CAC
Val
>WENV182065456
OHFA01004659
60880
Verrucomicrobiota
CAG
Leu
>WENV182065550
OHFA01009508
82056
Verrucomicrobiota
TAA
Leu
>WENV182065511
OHFA01007042
344842
Verrucomicrobiota
CGT
Thr
>WENV182065501
OHFA01006870
170105
Verrucomicrobiota
CAT
Met
>WENV182065540
OHFA01008961
345110
Verrucomicrobiota
CCT
Arg
>WENV182065485
OHFA01006002
344839
Verrucomicrobiota
GTG
His
>WENV182065343
OHFA01002147
7274
Verrucomicrobiota
CGA
Ser
>WENV182065544
OHFA01009033
246260
Verrucomicrobiota
>WENV182065713
OHFA01028290
155268
Verrucomicrobiota
CGG
Pro
>WENV182065697
OHFA01024601
246728
Verrucomicrobiota
GAA
Phe
>WENV182065525
OHFA01008003
7256
Verrucomicrobiota
GCT
Ser
>WENV182065573
OHFA01011852
345119
Verrucomicrobiota
TAC
Val
>WENV182065516
OHFA01007289
345124
Verrucomicrobiota
GTT
Asn
>WENV182065365
OHFA01002501
17023
Verrucomicrobiota
GGA
Ser
>WENV182065698
OHFA01024601
154693
Verrucomicrobiota
TGG
Pro
>WENV182065494
OHFA01006700
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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