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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182074063
OHFP01001520
196621
Bacillota
GTC
Asp
>WENV182073977
OHFP01000779
309417
Bacillota
GGC
Ala
>WENV182073883
OHFP01000293
352996
Bacillota
TTC
Glu
>WENV182074186
OHFP01004663
144612
Bacillota
TCT
Arg
>WENV182074475
OHFP01038200
144612
Bacillota
TCT
Arg
>WENV182073720
OHFP01000030
154063
Bacillota
CGG
Pro
>WENV182073919
OHFP01000432
235098
Bacillota
GAC
Val
>WENV182074147
OHFP01002929
235098
Bacillota
GAC
Val
>WENV182073885
OHFP01000294
44854
Bacillota
TGA
Ser
>WENV182074493
OHFP01043086
347827
Bacillota
TTC
Glu
>WENV182074233
OHFP01006932
307003
Bacillota
TGC
Ala
>WENV182074467
OHFP01035448
59312
Bacillota
CAG
Leu
>WENV182074178
OHFP01004490
238910
Bacillota
CTT
Lys
>WENV182074381
OHFP01019403
235150
Bacillota
TGC
Ala
>WENV182074224
OHFP01006594
340802
Bacillota
TTG
Gln
>WENV182074386
OHFP01019735
388249
Bacillota
GCA
Cys
>WENV182074228
OHFP01006774
144668
Bacillota
GTC
Asp
>WENV182074319
OHFP01011733
235091
Bacillota
CTT
Lys
>WENV182074332
OHFP01013279
429429
Bacillota
CCA
Trp
>WENV182074229
OHFP01006774
41154
Bacillota
TAA
Leu
>WENV182074004
OHFP01000937
11034
Bacillota
GGA
Ser
>WENV182073743
OHFP01000052
274189
Bacillota
TGT
Thr
>WENV182073962
OHFP01000673
338149
Bacillota
CTC
Glu
>WENV182074098
OHFP01001889
245298
Bacillota
CGG
Pro
>WENV182074009
OHFP01000994
287000
Bacillota
GTT
Asn
>WENV182074055
OHFP01001470
169968
Bacillota
CAT
Met
>WENV182074375
OHFP01018721
152492
Bacillota
GGG
Pro
>WENV182074097
OHFP01001889
411547
Bacillota
CTG
Gln
>WENV182074337
OHFP01014208
411547
Bacillota
CTG
Gln
>WENV182073886
OHFP01000294
4624
Bacillota
GCT
Ser
>WENV182074061
OHFP01001520
235095
Bacillota
GGT
Thr
>WENV182074064
OHFP01001520
235095
Bacillota
GGT
Thr
>WENV182073964
OHFP01000694
411549
Bacillota
TTG
Gln
>WENV182074089
OHFP01001820
148188
Bacillota
CCG
Arg
>WENV182073830
OHFP01000170
80612
Bacillota
GTA
Tyr
>WENV182074429
OHFP01026930
235127
Bacillota
TTT
Lys
>WENV182074307
OHFP01010636
163943
Bacillota
GTC
Asp
>WENV182074105
OHFP01002005
235124
Bacillota
TGG
Pro
>WENV182073858
OHFP01000223
144583
Bacillota
ACG
Arg
>WENV182074062
OHFP01001520
235171
Bacillota
CCA
Trp
>WENV182073963
OHFP01000673
144621
Bacillota
GTT
Asn
>WENV182074071
OHFP01001599
144621
Bacillota
GTT
Asn
>WENV182074276
OHFP01008374
144621
Bacillota
GTT
Asn
>WENV182074188
OHFP01004663
58712
Bacillota
CAG
Leu
>WENV182073887
OHFP01000305
245296
Bacillota
CCC
Gly
>WENV182074008
OHFP01000987
272992
Bacillota
CTT
Lys
>WENV182074201
OHFP01005175
344240
Bacillota
GCC
Gly
>WENV182073826
OHFP01000162
144594
Bacillota
CAC
Val
>WENV182074038
OHFP01001301
272488
Bacillota
GAA
Phe
>WENV182074323
OHFP01011985
338128
Bacillota
TTC
Glu
>WENV182074521
OHFP01052642
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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