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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182075985
OHFS01000458
119475
Actinomycetota
TAA
Leu
>WENV182075990
OHFS01000633
235092
Actinomycetota
CCG
Arg
>WENV182075993
OHFS01000775
16219
Actinomycetota
GCT
Ser
>WENV182075981
OHFS01000223
235101
Actinomycetota
TTT
Lys
>WENV182075975
OHFS01000083
144625
Actinomycetota
GTC
Asp
>WENV182075977
OHFS01000135
44862
Actinomycetota
CGA
Ser
>WENV182075979
OHFS01000162
16223
Actinomycetota
GAG
Leu
>WENV182075999
OHFS01000921
144593
Actinomycetota
TAT
Ile
>WENV182076000
OHFS01001136
98279
Actinomycetota
GTA
Tyr
>WENV182075970
OHFS01000041
338148
Actinomycetota
CTG
Gln
>WENV182075986
OHFS01000511
235148
Actinomycetota
GTT
Asn
>WENV182075989
OHFS01000600
176456
Actinomycetota
TCT
Arg
>WENV182075973
OHFS01000076
411554
Actinomycetota
CCC
Gly
>WENV182075968
OHFS01000026
113601
Actinomycetota
TAG
Leu
>WENV182075980
OHFS01000175
144595
Actinomycetota
CAA
Leu
>WENV182075976
OHFS01000121
145343
Actinomycetota
GGG
Pro
>WENV182075967
OHFS01000026
235121
Actinomycetota
CGT
Thr
>WENV182075982
OHFS01000364
80622
Actinomycetota
CAG
Leu
>WENV182075998
OHFS01000839
44851
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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