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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182076145
OHFV01000174
235102
Bacteroidota
CGT
Thr
>WENV182076074
OHFV01000012
267954
Bacteroidota
GCC
Gly
>WENV182076458
OHFV01003513
144657
Bacteroidota
CGG
Pro
>WENV182076434
OHFV01002878
243025
Bacteroidota
CAT
Met
>WENV182076401
OHFV01002057
338155
Bacteroidota
CTC
Glu
>WENV182076455
OHFV01003481
343138
Bacteroidota
CCT
Arg
>WENV182076524
OHFV01006729
58715
Bacteroidota
GAG
Leu
>WENV182076573
OHFV01013490
338486
Bacteroidota
CAT
Met
>WENV182076523
OHFV01006645
59689
Bacteroidota
CAG
Leu
>WENV182076172
OHFV01000230
436206
Bacteroidota
TTG
Gln
>WENV182076234
OHFV01000491
436206
Bacteroidota
TTG
Gln
>WENV182076291
OHFV01000790
436206
Bacteroidota
TTG
Gln
>WENV182076436
OHFV01003034
20893
Bacteroidota
GGA
Ser
>WENV182076356
OHFV01001308
338124
Bacteroidota
CCG
Arg
>WENV182076502
OHFV01005350
146800
Bacteroidota
>WENV182076305
OHFV01000871
235203
Bacteroidota
TTT
Lys
>WENV182076131
OHFV01000136
338132
Bacteroidota
GCA
Cys
>WENV182076466
OHFV01004043
58714
Bacteroidota
CAA
Leu
>WENV182076409
OHFV01002324
301449
Bacteroidota
CGG
Pro
>WENV182076086
OHFV01000023
144656
Bacteroidota
GTG
His
>WENV182076094
OHFV01000047
235207
Bacteroidota
CAT
Met
>WENV182076148
OHFV01000178
235207
Bacteroidota
CAT
Met
>WENV182076447
OHFV01003330
144659
Bacteroidota
GTG
His
>WENV182076459
OHFV01003513
235180
Bacteroidota
CCA
Trp
>WENV182076261
OHFV01000631
144596
Bacteroidota
GGC
Ala
>WENV182076125
OHFV01000112
80607
Bacteroidota
GTA
Tyr
>WENV182076069
OHFV01000009
16999
Bacteroidota
GGA
Ser
>WENV182076431
OHFV01002841
80614
Bacteroidota
>WENV182076440
OHFV01003246
154643
Bacteroidota
CAT
Met
>WENV182076130
OHFV01000130
144590
Bacteroidota
GTT
Asn
>WENV182076107
OHFV01000073
95559
Bacteroidota
TAG
Leu
>WENV182076317
OHFV01000953
419272
Bacteroidota
CTG
Gln
>WENV182076456
OHFV01003481
338164
Bacteroidota
TTC
Glu
>WENV182076552
OHFV01009697
95875
Bacteroidota
TAG
Leu
>WENV182076102
OHFV01000058
139743
Bacteroidota
GGG
Pro
>WENV182076263
OHFV01000638
139743
Bacteroidota
GGG
Pro
>WENV182076488
OHFV01004811
139743
Bacteroidota
GGG
Pro
>WENV182076071
OHFV01000010
44852
Bacteroidota
TAA
Leu
>WENV182076532
OHFV01008276
147439
Bacteroidota
TCT
Arg
>WENV182076438
OHFV01003079
411550
Bacteroidota
CTG
Gln
>WENV182076101
OHFV01000058
425638
Bacteroidota
CTG
Gln
>WENV182076147
OHFV01000177
425638
Bacteroidota
CTG
Gln
>WENV182076384
OHFV01001849
353927
Bacteroidota
TTC
Glu
>WENV182076496
OHFV01005112
23696
Bacteroidota
GCT
Ser
>WENV182076407
OHFV01002252
414426
Bacteroidota
CTG
Gln
>WENV182076126
OHFV01000115
55270
Bacteroidota
TGA
Ser
>WENV182076197
OHFV01000315
55270
Bacteroidota
TGA
Ser
>WENV182076386
OHFV01001871
55270
Bacteroidota
TGA
Ser
>WENV182076410
OHFV01002437
16224
Bacteroidota
GGA
Ser
>WENV182076185
OHFV01000268
16220
Bacteroidota
GGA
Ser
>WENV182076252
OHFV01000577
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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